C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5454
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052030 Gm5454-201 ENSMUSG00000047643 10090 + 13:103356250-103357704 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000052030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000052030 0.186±0.05 0.267±0.12 0.108±0.05 0.309±0.18 0.166±0.10 0.193±0.11 0.115±0.07 0.122±0.07 0.023±0.02 0.219±0.06 0.024±0.01 0.172±0.07 0.112±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OR CIL_0001OR_0002 CGP 13:102732486-103764504

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242066 ETV1-201 protein_coding Homo_sapiens 0 1753
ENST00000399357 ETV1-202 protein_coding Homo_sapiens 0 1277
ENST00000403527 ETV1-008 protein_coding Homo_sapiens 0 1749
ENST00000403685 ETV1-003 protein_coding Homo_sapiens 0 1753
ENST00000405192 ETV1-005 protein_coding Homo_sapiens 0 1157
ENST00000405218 ETV1-004 protein_coding Homo_sapiens 0 2036
ENST00000405358 ETV1-007 protein_coding Homo_sapiens 0 1964
ENST00000420159 ETV1-203 protein_coding Homo_sapiens 0 1757
ENST00000421381 ETV1-011 protein_coding Homo_sapiens 0 490
ENST00000430479 ETV1-001 protein_coding Homo_sapiens 0 2036
ENST00000431887 ETV1-012 protein_coding Homo_sapiens 0 385
ENST00000433547 ETV1-014 protein_coding Homo_sapiens 1e-19 100
ENST00000438956 ETV1-009 protein_coding Homo_sapiens 0 1205
ENST00000443137 ETV1-002 nonsense_mediated_decay Homo_sapiens 0 1363
ENST00000443608 ETV1-020 protein_coding Homo_sapiens 0 446
ENST00000460438 ETV1-019 retained_intron Homo_sapiens 0 385
ENST00000472931 ETV1-010 retained_intron Homo_sapiens 0 1321
ENST00000476355 ETV1-016 retained_intron Homo_sapiens 0 688
ENST00000476720 ETV1-022 processed_transcript Homo_sapiens 0 983
ENST00000483075 ETV1-018 processed_transcript Homo_sapiens 0 390
ENST00000493831 ETV1-021 retained_intron Homo_sapiens 0 250
ENST00000497115 ETV1-017 processed_transcript Homo_sapiens 0 721

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