C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031366-ENSDARG00000032704 CGP 7955 17:25391925-25417687
GeneTranscriptPositionBiotype
ENSDARG00000031366 (rtn4ip1)
reticulon 4 interacting protein 1 		ENSDART00000040032 (rtn4ip1-001) 25391925-25405537 protein_coding
ENSDARG00000031782 (aim1a)
absent in melanoma 1a 		ENSDART00000041721 (aim1a-201) 25369335-25390628 protein_coding
ENSDART00000132759 (aim1a-002) 25387822-25390832 retained_intron
ENSDART00000139451 (aim1a-001) 25323156-25391939 protein_coding
ENSDARG00000032704 (qrsl1)
glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 		ENSDART00000045615 (qrsl1-001) 25405669-25417687 protein_coding
ENSDART00000121700 (qrsl1-002) 25405686-25409577 retained_intron
CIL_0001OX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130347-ENSG00000130348 CGP 9606 6:106571971-106668417
GeneTranscriptPositionBiotype
ENSG00000130347 (RTN4IP1)
reticulon 4 interacting protein 1 		ENST00000369063 (RTN4IP1-001) 106571971-106629487 protein_coding
ENST00000493619 (RTN4IP1-002) 106571977-106572411 processed_transcript
ENST00000498091 (RTN4IP1-003) 106571975-106583631 processed_transcript
ENST00000539449 (RTN4IP1-201) 106572003-106629021 protein_coding
ENSG00000130348 (QRSL1)
glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 		ENST00000369044 (QRSL1-006) 106629614-106653823 protein_coding
ENST00000369046 (QRSL1-005) 106629578-106668417 protein_coding
ENST00000467262 (QRSL1-004) 106629599-106640862 processed_transcript
ENSG00000216977 (RPL21P65)
ribosomal protein L21 pseudogene 65 		ENST00000406094 (RPL21P65-001) 106642463-106642928 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OX_0001ENSDARG00000031366ENSDART00000040032ENSDARG00000031782ENSDART00000041721ENSDART00000132759ENSDART00000139451ENSDARG00000032704ENSDART00000045615ENSDART00000121700CIL_0001OX_0002ENSG00000130347ENST00000369063ENST00000493619ENST00000498091ENST00000539449ENSG00000130348ENST00000369044ENST00000369046ENST00000467262ENSG00000216977ENST00000406094
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OX_0001ENSDARG00000031366ENSDART00000040032ENSDARG00000031782ENSDART00000041721ENSDART00000139451ENSDARG00000032704ENSDART00000045615CIL_0001OX_0002ENSG00000130347ENST00000369063ENST00000493619ENST00000498091ENST00000539449ENSG00000130348ENST00000369044ENST00000369046ENSG00000216977ENST00000406094
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031366 ENSDART00000040032 N/A N/A N/A 7.373±0.69 N/A N/A 10.327±1.96 7.428±0.00 0.966±0.00 N/A 3.511±0.00 N/A N/A N/A
ENSDARG00000031782 ENSDART00000041721 N/A N/A N/A N/A N/A N/A 1.449±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139451 N/A N/A N/A 0.472±0.22 N/A N/A 0.865±0.23 0.991±0.19 0.046±0.00 N/A N/A N/A N/A N/A
ENSDARG00000032704 ENSDART00000045615 N/A N/A N/A 2.359±1.02 N/A N/A 3.347±1.54 9.720±4.59 1.188±0.00 N/A 2.659±0.00 N/A N/A N/A
ENSDART00000121700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130347 ENST00000369063 1.122±0.00 3.233±0.00 1.413±0.00 3.626±0.65 2.781±0.00 2.465±1.35 4.324±2.01 3.359±1.74 2.473±1.25 0.272±0.07 1.789±0.35 3.018±1.45 2.452±0.87 5.185±0.64
ENST00000493619 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.820±0.00 N/A N/A N/A N/A
ENST00000498091 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A
ENST00000539449 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A N/A N/A
ENSG00000130348 ENST00000369044 N/A 0.996±0.00 2.192±0.00 1.215±0.00 1.062±0.00 1.483±0.00 2.504±0.00 1.320±0.00 2.415±0.00 1.424±0.00 0.823±0.00 1.269±0.00 N/A N/A
ENST00000369046 1.564±0.00 3.825±0.00 1.004±0.00 1.807±0.65 1.330±0.71 1.431±0.39 2.169±1.28 2.367±1.59 1.656±0.66 0.985±0.21 2.254±0.20 3.674±0.73 2.103±0.32 2.346±0.36
ENST00000467262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216977 ENST00000406094 0.028±0.00 0.296±0.00 N/A N/A 0.105±0.08 0.082±0.00 0.028±0.00 0.515±0.34 1.516±0.00 0.313±0.00 0.457±0.00 0.909±0.75 N/A 0.180±0.10

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