C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076903-ENSDARG00000012563 CGP 7955 13:32865142-32949780
GeneTranscriptPositionBiotype
ENSDARG00000012563 (pdss2)
prenyl (decaprenyl) diphosphate synthase, subunit 2 		ENSDART00000012232 (pdss2-001) 32884146-32949780 protein_coding
ENSDARG00000076903 (bend3)
BEN domain containing 3 		ENSDART00000112292 (bend3-201) 32866701-32871219 protein_coding
ENSDART00000132820 (bend3-001) 32865142-32872018 protein_coding
ENSDART00000138571 (bend3-002) 32868876-32871984 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001OZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178409-ENSG00000164494 CGP 9606 6:107065182-107459564
GeneTranscriptPositionBiotype
ENSG00000164494 (PDSS2)
prenyl (decaprenyl) diphosphate synthase, subunit 2 		ENST00000369031 (PDSS2-002) 107264186-107459564 protein_coding
ENST00000369037 (PDSS2-001) 107152557-107459563 protein_coding
ENST00000449027 (PDSS2-003) 107197841-107212159 protein_coding
ENSG00000178409 (BEND3)
BEN domain containing 3 		ENST00000369042 (BEND3-001) 107065182-107115269 protein_coding
ENST00000429433 (BEND3-201) 107065187-107114432 protein_coding
ENSG00000220237 (RPS24P12)
ribosomal protein S24 pseudogene 12 		ENST00000402084 (RPS24P12-001) 107229759-107230152 processed_pseudogene
ENSG00000276620 (RP11-300D11.3)
 ENST00000611326 (RP11-300D11.3-001) 107192300-107192573 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OZ_0001ENSDARG00000012563ENSDART00000012232ENSDARG00000076903ENSDART00000112292ENSDART00000132820ENSDART00000138571CIL_0001OZ_0002ENSG00000164494ENST00000369031ENST00000369037ENST00000449027ENSG00000178409ENST00000369042ENST00000429433ENSG00000220237ENST00000402084ENSG00000276620ENST00000611326
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OZ_0001ENSDARG00000012563ENSDART00000012232ENSDARG00000076903ENSDART00000112292ENSDART00000132820CIL_0001OZ_0002ENSG00000164494ENST00000369031ENST00000369037ENSG00000178409ENST00000369042ENST00000429433ENSG00000220237ENST00000402084ENSG00000276620ENST00000611326
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012563 ENSDART00000012232 N/A N/A N/A 2.408±1.27 N/A N/A 5.156±3.40 2.666±2.60 0.911±0.00 N/A 3.450±0.00 N/A N/A N/A
ENSDARG00000076903 ENSDART00000112292 N/A N/A N/A 0.629±0.00 N/A N/A 0.611±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132820 N/A N/A N/A 2.660±0.51 N/A N/A 1.837±0.54 1.072±0.02 0.731±0.00 N/A 1.670±0.00 N/A N/A N/A
ENSDART00000138571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164494 ENST00000369031 1.037±0.00 1.668±0.00 N/A 0.701±0.00 N/A N/A N/A N/A N/A 0.721±0.00 N/A 3.383±0.41 2.657±0.36 1.355±0.00
ENST00000369037 1.560±0.00 1.339±0.00 0.400±0.00 1.669±0.26 2.880±0.88 2.906±0.13 3.110±1.26 5.382±1.59 4.032±1.96 1.728±0.43 1.055±0.02 3.245±0.37 1.658±0.56 1.590±0.69
ENST00000449027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178409 ENST00000369042 0.548±0.00 1.056±0.00 0.076±0.00 0.570±0.00 0.566±0.11 0.590±0.07 0.219±0.20 0.712±0.00 0.387±0.28 0.430±0.18 0.515±0.44 1.099±0.62 0.402±0.21 0.927±0.38
ENST00000429433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.858±0.00 N/A 0.507±0.00
ENSG00000220237 ENST00000402084 N/A N/A N/A 0.187±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.276±0.00
ENSG00000276620 ENST00000611326 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A 0.231±0.00 0.053±0.00 N/A N/A N/A

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