C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053776-ENSDARG00000075257 CGP 7955 12:32098103-32151324
GeneTranscriptPositionBiotype
ENSDARG00000053776 (dclre1a)
DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) 		ENSDART00000075876 (dclre1a-201) 32098103-32112570 protein_coding
ENSDARG00000075257 (NHLRC2 (1 of 2))
NHL repeat containing 2 		ENSDART00000113648 (NHLRC2 (1 of 2)-201) 32113013-32151324 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001QY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198924-ENSG00000196865 CGP 9606 10:113834725-113917194
GeneTranscriptPositionBiotype
ENSG00000196865 (NHLRC2)
NHL repeat containing 2 		ENST00000369301 (NHLRC2-001) 113854661-113917194 protein_coding
ENST00000468890 (NHLRC2-002) 113854824-113858852 retained_intron
ENSG00000198924 (DCLRE1A)
DNA cross-link repair 1A 		ENST00000361384 (DCLRE1A-002) 113834725-113854100 protein_coding
ENST00000369305 (DCLRE1A-001) 113834729-113854383 protein_coding
ENST00000476112 (DCLRE1A-003) 113853243-113854340 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001QY_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025077-ENSMUSG00000025078 CGP 10090 19:56529167-56598846
GeneTranscriptPositionBiotype
ENSMUSG00000025078 (Nhlrc2)
NHL repeat containing 2 		ENSMUST00000071423 (Nhlrc2-201) 56548261-56598846 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QY_0001ENSDARG00000053776ENSDART00000075876ENSDARG00000075257ENSDART00000113648CIL_0001QY_0002ENSG00000196865ENST00000369301ENST00000468890ENSG00000198924ENST00000361384ENST00000369305ENST00000476112CIL_0001QY_0003ENSMUSG00000025078ENSMUST00000071423
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QY_0001ENSDARG00000053776ENSDART00000075876ENSDARG00000075257ENSDART00000113648CIL_0001QY_0002ENSG00000196865ENST00000369301ENSG00000198924ENST00000361384ENST00000369305ENST00000476112CIL_0001QY_0003ENSMUSG00000025078ENSMUST00000071423
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053776 ENSDART00000075876 N/A N/A N/A 0.498±0.22 N/A N/A 0.535±0.04 N/A 0.146±0.00 N/A 0.211±0.00 N/A N/A N/A
ENSDARG00000075257 ENSDART00000113648 N/A N/A N/A 0.281±0.08 N/A N/A 0.292±0.17 0.054±0.00 0.018±0.00 N/A 0.027±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196865 ENST00000369301 3.607±0.00 2.402±0.00 1.248±0.00 1.963±0.01 3.804±0.27 2.202±0.57 5.731±1.37 3.176±0.31 1.467±0.00 1.561±0.23 1.982±0.80 3.871±2.64 0.927±0.44 2.206±0.72
ENST00000468890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198924 ENST00000361384 N/A 0.695±0.00 N/A 1.176±0.15 0.594±0.38 0.337±0.00 0.424±0.20 1.008±0.45 0.554±0.08 1.309±0.00 N/A 0.979±0.36 0.440±0.31 0.319±0.08
ENST00000369305 0.461±0.00 0.340±0.00 0.248±0.00 0.943±0.00 0.179±0.00 N/A 0.432±0.00 0.580±0.00 1.373±0.00 0.429±0.00 0.313±0.00 1.789±1.12 1.376±0.51 1.800±0.08
ENST00000476112 N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025078 ENSMUST00000071423 N/A 2.756±0.70 N/A N/A 3.316±2.01 8.506±1.72 0.811±0.00 3.004±0.79 2.687±0.54 10.255±0.76 N/A 8.555±2.66 3.193±0.34 0.992±0.49

Loading