C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053776-ENSDARG00000075257 CGP 7955 12:32098103-32151324
GeneTranscriptPositionBiotype
ENSDARG00000053776 (dclre1a)
DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) 		ENSDART00000075876 (dclre1a-201) 32098103-32112570 protein_coding
ENSDARG00000075257 (NHLRC2 (1 of 2))
NHL repeat containing 2 		ENSDART00000113648 (NHLRC2 (1 of 2)-201) 32113013-32151324 protein_coding
CIL_0001QY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198924-ENSG00000196865 CGP 9606 10:113834725-113917194
GeneTranscriptPositionBiotype
ENSG00000196865 (NHLRC2)
NHL repeat containing 2 		ENST00000369301 (NHLRC2-001) 113854661-113917194 protein_coding
ENST00000468890 (NHLRC2-002) 113854824-113858852 retained_intron
ENSG00000198924 (DCLRE1A)
DNA cross-link repair 1A 		ENST00000361384 (DCLRE1A-002) 113834725-113854100 protein_coding
ENST00000369305 (DCLRE1A-001) 113834729-113854383 protein_coding
ENST00000476112 (DCLRE1A-003) 113853243-113854340 processed_transcript
CIL_0001QY_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025077-ENSMUSG00000025078 CGP 10090 19:56529167-56598846
GeneTranscriptPositionBiotype
ENSMUSG00000025078 (Nhlrc2)
NHL repeat containing 2 		ENSMUST00000071423 (Nhlrc2-201) 56548261-56598846 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QY_0001ENSDARG00000053776ENSDART00000075876ENSDARG00000075257ENSDART00000113648CIL_0001QY_0002ENSG00000196865ENST00000369301ENST00000468890ENSG00000198924ENST00000361384ENST00000369305ENST00000476112CIL_0001QY_0003ENSMUSG00000025078ENSMUST00000071423
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QY_0001ENSDARG00000053776ENSDART00000075876ENSDARG00000075257ENSDART00000113648CIL_0001QY_0002ENSG00000196865ENST00000369301ENSG00000198924ENST00000361384ENST00000369305ENST00000476112CIL_0001QY_0003ENSMUSG00000025078ENSMUST00000071423
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053776 ENSDART00000075876 N/A N/A N/A 0.498±0.22 N/A N/A 0.535±0.04 N/A 0.146±0.00 N/A 0.211±0.00 N/A N/A N/A
ENSDARG00000075257 ENSDART00000113648 N/A N/A N/A 0.281±0.08 N/A N/A 0.292±0.17 0.054±0.00 0.018±0.00 N/A 0.027±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196865 ENST00000369301 3.607±0.00 2.402±0.00 1.248±0.00 1.963±0.01 3.804±0.27 2.202±0.57 5.731±1.37 3.176±0.31 1.467±0.00 1.561±0.23 1.982±0.80 3.871±2.64 0.927±0.44 2.206±0.72
ENST00000468890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198924 ENST00000361384 N/A 0.695±0.00 N/A 1.176±0.15 0.594±0.38 0.337±0.00 0.424±0.20 1.008±0.45 0.554±0.08 1.309±0.00 N/A 0.979±0.36 0.440±0.31 0.319±0.08
ENST00000369305 0.461±0.00 0.340±0.00 0.248±0.00 0.943±0.00 0.179±0.00 N/A 0.432±0.00 0.580±0.00 1.373±0.00 0.429±0.00 0.313±0.00 1.789±1.12 1.376±0.51 1.800±0.08
ENST00000476112 N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025078 ENSMUST00000071423 N/A 2.756±0.70 N/A N/A 3.316±2.01 8.506±1.72 0.811±0.00 3.004±0.79 2.687±0.54 10.255±0.76 N/A 8.555±2.66 3.193±0.34 0.992±0.49

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