C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NHL repeat containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369301 NHLRC2-001 ENSG00000196865 9606 + 10:113854661-113917194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369301
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369301 3.607±0.00 2.402±0.00 1.248±0.00 1.963±0.01 3.804±0.27 2.202±0.57 5.731±1.37 3.176±0.31 1.467±0.00 1.561±0.23 1.982±0.80 3.871±2.64 0.927±0.44 2.206±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QY CIL_0001QY_0002 CGP 10:113834725-113917194
CIL_0001R7 CIL_0001R7_0002 CGP 10:113854661-114046908

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071423 Nhlrc2-201 protein_coding Mus_musculus 0 1973
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000001 62
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000004 60
ENSMUST00000037912 Ssh2-001 protein_coding Mus_musculus 0.000004 60
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.000004 60

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