C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000258653-ENSG00000119725 CGP 9606 14:73851971-73932511
GeneTranscriptPositionBiotype
ENSG00000156050 (FAM161B)
family with sequence similarity 161, member B 		ENST00000286544 (FAM161B-001) 73932510-73950414 protein_coding
ENST00000556794 (FAM161B-003) 73931501-73938094 protein_coding
ENSG00000199472 (Y_RNA)
Y RNA 		ENST00000362602 (Y_RNA.1-236) 73906316-73906427 misc_RNA
ENSG00000270140 (RP5-1021I20.6)
 ENST00000602874 (RP5-1021I20.6-001) 73905267-73905636 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0001TJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000072946-ENSMUSG00000042472 CGP 10090 12:84285232-84343830
GeneTranscriptPositionBiotype
ENSMUSG00000042472 (Zfp410)
zinc finger protein 410 		ENSMUST00000045931 (Zfp410-201) 84316859-84343830 protein_coding
ENSMUSG00000072946 (Ptgr2)
prostaglandin reductase 2 		ENSMUST00000123614 (Ptgr2-001) 84285232-84315832 protein_coding
ENSMUST00000123693 (Ptgr2-003) 84285413-84314102 nonsense_mediated_decay
ENSMUST00000128158 (Ptgr2-007) 84285381-84298366 retained_intron
ENSMUST00000128541 (Ptgr2-008) 84285384-84308432 processed_transcript
ENSMUST00000135001 (Ptgr2-002) 84285400-84314102 protein_coding
ENSMUST00000138733 (Ptgr2-004) 84285365-84304023 retained_intron
ENSMUST00000146377 (Ptgr2-006) 84285406-84314854 protein_coding
ENSMUST00000147363 (Ptgr2-005) 84285374-84309953 protein_coding
ENSMUST00000150720 (Ptgr2-009) 84285399-84306079 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TJ_0001ENSG00000156050ENST00000286544ENST00000556794ENSG00000199472ENST00000362602ENSG00000270140ENST00000602874CIL_0001TJ_0002ENSMUSG00000042472ENSMUST00000045931ENSMUSG00000072946ENSMUST00000123614ENSMUST00000123693ENSMUST00000128158ENSMUST00000128541ENSMUST00000135001ENSMUST00000138733ENSMUST00000146377ENSMUST00000147363ENSMUST00000150720
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TJ_0001ENSG00000156050ENST00000286544ENST00000556794ENSG00000199472ENST00000362602ENSG00000270140ENST00000602874CIL_0001TJ_0002ENSMUSG00000042472ENSMUST00000045931ENSMUSG00000072946ENSMUST00000123614ENSMUST00000123693ENSMUST00000135001ENSMUST00000146377ENSMUST00000150720
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156050 ENST00000286544 N/A N/A N/A 3.941±0.00 N/A N/A N/A N/A N/A N/A N/A 16.263±0.00 N/A N/A
ENST00000556794 N/A 23.668±0.00 N/A N/A N/A 30.416±0.00 N/A N/A N/A 32.021±0.00 N/A 33.620±9.15 16.984±1.86 50.973±1.35
ENSG00000199472 ENST00000362602 N/A 1.113±0.00 N/A N/A N/A N/A N/A N/A N/A 11.956±0.00 N/A N/A N/A N/A
ENSG00000270140 ENST00000602874 N/A 0.239±0.00 2.301±0.00 0.105±0.00 0.468±0.00 0.530±0.34 0.066±0.00 0.135±0.00 0.794±0.00 0.031±0.00 0.153±0.00 0.255±0.00 N/A 0.204±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042472 ENSMUST00000045931 6.421±0.79 2.800±0.76 10.201±1.03 9.673±5.89 4.111±1.89 3.795±1.09 4.330±0.41 4.967±0.29 7.654±4.75 4.432±0.60 3.817±0.70 7.040±3.19 7.999±2.75 3.138±1.00
ENSMUSG00000072946 ENSMUST00000123614 16.199±3.91 7.421±0.56 13.365±0.17 5.594±3.49 6.433±3.09 4.991±0.94 26.826±2.20 19.504±2.92 9.926±2.87 8.436±1.37 15.416±2.34 5.231±3.89 7.322±1.53 2.234±0.95
ENSMUST00000123693 N/A N/A N/A N/A N/A 1.650±0.00 N/A N/A N/A N/A N/A 1.793±0.09 4.065±0.00 N/A
ENSMUST00000128158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135001 N/A 9.874±0.23 N/A N/A 5.696±1.47 4.241±0.16 16.246±2.28 9.710±2.05 5.632±1.01 N/A N/A 3.384±1.44 5.202±0.47 4.161±0.46
ENSMUST00000138733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146377 N/A 1.477±0.00 N/A N/A N/A N/A N/A N/A 1.698±0.00 N/A 4.983±0.36 2.124±0.00 2.121±0.00 N/A
ENSMUST00000147363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.884±0.00 19.218±5.58 24.742±0.00

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