C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prostaglandin reductase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072946 Ptgr2 10090 + 12:84285232-84315832 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000123614 Ptgr2-001 84285232-84315832 protein_coding
  ENSMUST00000123693 Ptgr2-003 84285413-84314102 nonsense_mediated_decay
  ENSMUST00000128158 Ptgr2-007 84285381-84298366 retained_intron
  ENSMUST00000128541 Ptgr2-008 84285384-84308432 processed_transcript
  ENSMUST00000135001 Ptgr2-002 84285400-84314102 protein_coding
  ENSMUST00000138733 Ptgr2-004 84285365-84304023 retained_intron
  ENSMUST00000146377 Ptgr2-006 84285406-84314854 protein_coding
  ENSMUST00000147363 Ptgr2-005 84285374-84309953 protein_coding
  ENSMUST00000150720 Ptgr2-009 84285399-84306079 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000123614ENSMUST00000123693ENSMUST00000135001ENSMUST00000146377ENSMUST00000150720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000123614 16.199±3.91 7.421±0.56 13.365±0.17 5.594±3.49 6.433±3.09 4.991±0.94 26.826±2.20 19.504±2.92 9.926±2.87 8.436±1.37 15.416±2.34 5.231±3.89 7.322±1.53 2.234±0.95
ENSMUST00000123693 N/A N/A N/A N/A N/A 1.650±0.00 N/A N/A N/A N/A N/A 1.793±0.09 4.065±0.00 N/A
ENSMUST00000135001 N/A 9.874±0.23 N/A N/A 5.696±1.47 4.241±0.16 16.246±2.28 9.710±2.05 5.632±1.01 N/A N/A 3.384±1.44 5.202±0.47 4.161±0.46
ENSMUST00000146377 N/A 1.477±0.00 N/A N/A N/A N/A N/A N/A 1.698±0.00 N/A 4.983±0.36 2.124±0.00 2.121±0.00 N/A
ENSMUST00000150720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.884±0.00 19.218±5.58 24.742±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0002 VISTA 12:83875691-84476743
CIL_0003PQ CIL_0003PQ_0002 CGP 12:84149176-84315832
CIL_0001TJ CIL_0001TJ_0002 CGP 12:84285232-84343830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005829 TAS cytosol
GO:0006693 ISS prostaglandin metabolic process
GO:0008270 IEA zinc ion binding
GO:0016491 IEA oxidoreductase activity
GO:0036132 IEA 13-prostaglandin reductase activity
GO:0047522 ISS 15-oxoprostaglandin 13-oxidase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070673 PTGR2 prostaglandin reductase 2 protein_coding Danio_rerio
ENSG00000140043 PTGR2 prostaglandin reductase 2 protein_coding Homo_sapiens
ENSG00000258653 RP5-1021I20.4 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000451484} protein_coding Homo_sapiens

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