C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001U5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125798-ENSG00000132671 CGP 9606 20:22581005-23036812
GeneTranscriptPositionBiotype
ENSG00000125798 (FOXA2)
forkhead box A2 		ENST00000377115 (FOXA2-001) 22581005-22585455 protein_coding
ENST00000419308 (FOXA2-002) 22581005-22584463 protein_coding
ENSG00000132671 (SSTR4)
somatostatin receptor 4 		ENST00000255008 (SSTR4-001) 23035386-23036812 protein_coding
ENSG00000215553 (KRT18P3)
keratin 18 pseudogene 3 		ENST00000451602 (KRT18P3-001) 22732802-22734089 processed_pseudogene
ENSG00000228935 (RP11-189G24.2)
 ENST00000415260 (RP11-189G24.2-001) 22960534-22966063 processed_pseudogene
ENSG00000230400 (RP11-359G22.2)
 ENST00000437696 (RP11-359G22.2-002) 22683662-22685344 lincRNA
ENST00000441568 (RP11-359G22.2-001) 22676072-22684878 lincRNA
ENSG00000230492 (RP4-753D10.5)
 ENST00000440798 (RP4-753D10.5-001) 23010209-23030785 antisense
ENSG00000234646 (RP4-753D10.3)
 ENST00000419734 (RP4-753D10.3-002) 23038223-23039236 sense_overlapping
ENST00000440921 (RP4-753D10.3-001) 23031542-23039236 sense_overlapping
ENSG00000265151 (AL158175.1)
 ENST00000581262 (AL158175.1-201) 22733210-22733301 miRNA
CIL_0001U5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037025-ENSMUSG00000037014 CGP 10090 2:148042877-148396767
GeneTranscriptPositionBiotype
ENSMUSG00000037014 (Sstr4)
somatostatin receptor 4 		ENSMUST00000109962 (Sstr4-001) 148395344-148396767 protein_coding
ENSMUSG00000037025 (Foxa2)
forkhead box A2 		ENSMUST00000047315 (Foxa2-001) 148042877-148046969 protein_coding
ENSMUST00000109964 (Foxa2-002) 148042877-148045948 protein_coding
ENSMUST00000146242 (Foxa2-003) 148044240-148045464 processed_transcript
ENSMUST00000172928 (Foxa2-004) 148043542-148046896 protein_coding
ENSMUSG00000083750 (Gm14108)
predicted gene 14108 		ENSMUST00000122234 (Gm14108-001) 148071346-148071839 processed_pseudogene
ENSMUSG00000089458 (Gm24221)
predicted gene, 24221 		ENSMUST00000158833 (Gm24221-201) 148151150-148151462 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001U5_0001ENSG00000125798ENST00000377115ENST00000419308ENSG00000132671ENST00000255008ENSG00000215553ENST00000451602ENSG00000228935ENST00000415260ENSG00000230400ENST00000437696ENST00000441568ENSG00000230492ENST00000440798ENSG00000234646ENST00000419734ENST00000440921ENSG00000265151ENST00000581262CIL_0001U5_0002ENSMUSG00000037014ENSMUST00000109962ENSMUSG00000037025ENSMUST00000047315ENSMUST00000109964ENSMUST00000146242ENSMUST00000172928ENSMUSG00000083750ENSMUST00000122234ENSMUSG00000089458ENSMUST00000158833
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001U5_0001ENSG00000125798ENST00000377115ENST00000419308ENSG00000132671ENST00000255008ENSG00000215553ENST00000451602ENSG00000228935ENST00000415260ENSG00000230400ENST00000437696ENST00000441568ENSG00000230492ENST00000440798ENSG00000234646ENST00000419734ENST00000440921ENSG00000265151ENST00000581262CIL_0001U5_0002ENSMUSG00000037014ENSMUST00000109962ENSMUSG00000037025ENSMUST00000047315ENSMUST00000109964ENSMUST00000146242ENSMUST00000172928ENSMUSG00000083750ENSMUST00000122234ENSMUSG00000089458ENSMUST00000158833
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125798 ENST00000377115 0.254±0.00 N/A N/A 0.011±0.00 2.607±0.00 1.260±0.54 N/A 1.601±1.48 16.617±0.00 3.145±1.41 N/A 16.350±13.27 0.026±0.00 0.364±0.14
ENST00000419308 N/A N/A N/A N/A 0.762±0.00 N/A N/A N/A N/A 1.750±0.67 N/A 8.995±4.93 N/A N/A
ENSG00000132671 ENST00000255008 N/A 0.053±0.00 N/A 0.297±0.24 N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A 0.076±0.00 0.051±0.00
ENSG00000215553 ENST00000451602 N/A 0.014±0.00 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A
ENSG00000228935 ENST00000415260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00
ENSG00000230400 ENST00000437696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.07
ENST00000441568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.02 0.017±0.00 0.068±0.03
ENSG00000230492 ENST00000440798 N/A 0.342±0.00 N/A N/A 0.061±0.00 0.037±0.00 N/A N/A N/A 0.036±0.00 N/A 0.053±0.00 N/A 1.936±1.83
ENSG00000234646 ENST00000419734 N/A 0.451±0.00 N/A 0.559±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00
ENST00000440921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.310±0.14
ENSG00000265151 ENST00000581262 N/A N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037014 ENSMUST00000109962 1.042±0.42 0.431±0.08 N/A 0.480±0.03 0.313±0.04 0.515±0.09 0.687±0.11 0.165±0.06 0.018±0.01 2.547±0.77 0.062±0.00 0.462±0.20 0.309±0.30 0.040±0.00
ENSMUSG00000037025 ENSMUST00000047315 N/A N/A N/A N/A N/A N/A N/A N/A 5.296±3.48 5.452±0.00 N/A 0.703±0.33 1.351±0.00 N/A
ENSMUST00000109964 2.889±1.36 N/A 0.012±0.01 1.140±0.78 0.064±0.05 26.282±7.78 0.090±0.01 0.015±0.00 7.581±5.04 23.797±6.37 N/A 2.236±0.90 4.690±3.98 0.036±0.03
ENSMUST00000146242 N/A 0.060±0.03 0.049±0.00 0.169±0.00 0.040±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00
ENSMUST00000172928 0.032±0.00 N/A 0.029±0.01 1.840±0.00 N/A N/A N/A 0.069±0.00 2.520±1.75 N/A 0.242±0.00 N/A N/A 0.033±0.01
ENSMUSG00000083750 ENSMUST00000122234 N/A N/A 0.041±0.00 N/A 0.177±0.05 N/A N/A 0.108±0.00 0.016±0.00 0.215±0.10 N/A 0.122±0.01 0.013±0.00 0.065±0.00
ENSMUSG00000089458 ENSMUST00000158833 N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A 0.350±0.00 N/A N/A 0.111±0.00 N/A

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