C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106799-ENSG00000119523 CGP 9606 9:99104038-99221956
GeneTranscriptPositionBiotype
ENSG00000106799 (TGFBR1)
transforming growth factor, beta receptor 1 		ENST00000374990 (TGFBR1-003) 99105111-99153649 protein_coding
ENST00000374994 (TGFBR1-001) 99105089-99154192 protein_coding
ENST00000546584 (TGFBR1-012) 99127934-99132739 protein_coding
ENST00000547314 (TGFBR1-008) 99104038-99132726 protein_coding
ENST00000548365 (TGFBR1-011) 99127874-99132703 protein_coding
ENST00000549021 (TGFBR1-010) 99127775-99138064 protein_coding
ENST00000549766 (TGFBR1-005) 99105150-99149528 nonsense_mediated_decay
ENST00000550253 (TGFBR1-007) 99127916-99149341 protein_coding
ENST00000552516 (TGFBR1-004) 99105150-99153658 protein_coding
ENST00000552573 (TGFBR1-009) 99104070-99132739 protein_coding
ENSG00000119523 (ALG2)
ALG2, alpha-1,3/1,6-mannosyltransferase 		ENST00000238477 (ALG2-001) 99216426-99221942 nonsense_mediated_decay
ENST00000319033 (ALG2-201) 99217372-99221140 protein_coding
ENST00000476832 (ALG2-002) 99217367-99221956 protein_coding
ENSG00000227269 (RP11-96L7.2)
 ENST00000450399 (RP11-96L7.2-001) 99183373-99184891 lincRNA
ENSG00000240235 (RN7SL794P)
RNA, 7SL, cytoplasmic 794, pseudogene 		ENST00000469816 (RN7SL794P-201) 99185587-99185866 misc_RNA
ENSG00000252942 (RNA5SP290)
RNA, 5S ribosomal pseudogene 290 		ENST00000517133 (RNA5SP290-201) 99145840-99145966 rRNA
CIL_0001ZZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007613-ENSMUSG00000039740 CGP 10090 4:47353222-47474333
GeneTranscriptPositionBiotype
ENSMUSG00000007613 (Tgfbr1)
transforming growth factor, beta receptor I 		ENSMUST00000007757 (Tgfbr1-001) 47353222-47414931 protein_coding
ENSMUST00000044234 (Tgfbr1-003) 47353307-47412133 protein_coding
ENSMUST00000107725 (Tgfbr1-002) 47386216-47411035 protein_coding
ENSMUST00000123962 (Tgfbr1-005) 47353598-47361313 processed_transcript
ENSMUST00000126171 (Tgfbr1-004) 47353610-47410807 protein_coding
ENSMUSG00000039740 (Alg2)
asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) 		ENSMUST00000044148 (Alg2-001) 47469833-47474333 protein_coding
ENSMUST00000136912 (Alg2-003) 47465067-47470770 processed_transcript
ENSMUST00000143104 (Alg2-002) 47471894-47473977 protein_coding
ENSMUSG00000081152 (Gm12430)
predicted gene 12430 		ENSMUST00000121539 (Gm12430-001) 47453632-47454953 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZZ_0001ENSG00000106799ENST00000374990ENST00000374994ENST00000546584ENST00000547314ENST00000548365ENST00000549021ENST00000549766ENST00000550253ENST00000552516ENST00000552573ENSG00000119523ENST00000238477ENST00000319033ENST00000476832ENSG00000227269ENST00000450399ENSG00000240235ENST00000469816ENSG00000252942ENST00000517133CIL_0001ZZ_0002ENSMUSG00000007613ENSMUST00000007757ENSMUST00000044234ENSMUST00000107725ENSMUST00000123962ENSMUST00000126171ENSMUSG00000039740ENSMUST00000044148ENSMUST00000136912ENSMUST00000143104ENSMUSG00000081152ENSMUST00000121539
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZZ_0001ENSG00000106799ENST00000374990ENST00000374994ENST00000549021ENST00000550253ENST00000552516ENSG00000119523ENST00000238477ENST00000319033ENST00000476832ENSG00000227269ENST00000450399ENSG00000240235ENST00000469816ENSG00000252942ENST00000517133CIL_0001ZZ_0002ENSMUSG00000007613ENSMUST00000007757ENSMUST00000107725ENSMUST00000126171ENSMUSG00000039740ENSMUST00000044148ENSMUSG00000081152ENSMUST00000121539
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106799 ENST00000374990 3.325±0.00 1.455±0.00 N/A 3.192±0.00 2.625±0.00 0.778±0.00 0.967±0.00 2.642±0.00 0.784±0.00 1.300±0.00 0.683±0.00 1.168±0.00 0.826±0.00 1.904±0.00
ENST00000374994 N/A 0.805±0.00 N/A 2.004±0.00 0.894±0.00 1.446±0.00 0.970±0.00 0.852±0.04 2.199±0.00 1.181±0.18 0.765±0.48 2.809±1.78 2.905±0.72 0.901±0.00
ENST00000546584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.581±0.00
ENST00000549766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550253 N/A N/A N/A N/A 5.413±0.00 N/A N/A N/A N/A N/A N/A 4.057±0.00 N/A 6.219±0.00
ENST00000552516 1.077±0.00 0.695±0.00 1.734±0.00 1.467±0.16 2.726±1.70 2.022±0.00 1.239±0.28 1.275±0.00 3.123±2.01 6.001±1.52 1.709±0.00 2.161±1.18 7.621±7.24 4.952±0.53
ENST00000552573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119523 ENST00000238477 1.212±0.00 N/A N/A 0.645±0.00 0.788±0.00 0.581±0.14 0.536±0.00 1.919±0.83 1.287±0.78 N/A N/A 0.824±0.15 N/A N/A
ENST00000319033 N/A 1.589±0.00 2.992±0.00 1.829±0.00 1.024±0.00 0.745±0.00 N/A N/A N/A 2.516±0.85 1.759±0.00 2.202±0.00 3.712±0.00 N/A
ENST00000476832 5.576±0.00 5.988±0.00 1.277±0.00 2.355±1.47 4.196±0.29 3.999±1.27 2.609±0.89 22.688±0.00 6.574±5.38 4.736±2.75 2.034±0.21 7.978±4.05 14.741±2.36 10.399±0.84
ENSG00000227269 ENST00000450399 N/A 0.297±0.00 N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.00 0.039±0.00
ENSG00000240235 ENST00000469816 N/A 0.243±0.00 N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252942 ENST00000517133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.177±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007613 ENSMUST00000007757 4.061±2.00 4.609±1.40 8.156±2.67 7.897±5.47 2.788±1.02 2.756±0.71 0.976±0.38 3.666±0.63 2.099±1.07 4.610±1.52 2.321±0.64 9.465±3.73 4.849±3.78 2.266±1.13
ENSMUST00000044234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107725 N/A N/A N/A 1.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.851±3.13
ENSMUST00000123962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126171 N/A N/A N/A N/A N/A 1.606±0.00 N/A N/A N/A N/A N/A N/A N/A 6.069±0.00
ENSMUSG00000039740 ENSMUST00000044148 14.487±3.08 104.524±8.95 7.973±0.56 39.647±15.87 12.862±3.92 12.963±0.55 2.464±0.74 12.577±0.45 7.364±3.07 11.242±0.34 3.460±0.47 26.593±7.24 8.361±2.52 2.526±1.09
ENSMUST00000136912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081152 ENSMUST00000121539 0.037±0.00 0.269±0.18 0.054±0.00 0.124±0.03 0.465±0.33 0.117±0.06 0.203±0.00 0.043±0.00 0.073±0.06 0.151±0.07 0.056±0.03 0.264±0.25 0.022±0.01 0.045±0.02

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