C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014871-ENSDARG00000014945 CGP 7955 3:40164998-40197389
GeneTranscriptPositionBiotype
ENSDARG00000014871 (syngr3a)
synaptogyrin 3a 		ENSDART00000011568 (syngr3a-001) 40164998-40174983 protein_coding
ENSDARG00000014945 (znf598)
zinc finger protein 598 		ENSDART00000074757 (znf598-001) 40180035-40197389 protein_coding
CIL_00029C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127561-ENSG00000167962 CGP 9606 16:1989660-2009823
GeneTranscriptPositionBiotype
ENSG00000127561 (SYNGR3)
synaptogyrin 3 		ENST00000248121 (SYNGR3-001) 1989945-1994275 protein_coding
ENST00000562045 (SYNGR3-005) 1991124-1993374 protein_coding
ENST00000563869 (SYNGR3-003) 1989660-1993169 protein_coding
ENST00000564642 (SYNGR3-006) 1992463-1993298 retained_intron
ENST00000568896 (SYNGR3-004) 1990157-1992711 protein_coding
ENST00000618464 (SYNGR3-201) 1989999-1994267 protein_coding
ENSG00000167962 (ZNF598)
zinc finger protein 598 		ENST00000431526 (ZNF598-201) 1997655-2009821 protein_coding
ENST00000561787 (ZNF598-007) 1999894-2001744 retained_intron
ENST00000562103 (ZNF598-004) 1998232-2009747 protein_coding
ENST00000562988 (ZNF598-003) 1997654-2009764 retained_intron
ENST00000563630 (ZNF598-001) 1997654-2009823 protein_coding
ENST00000564556 (ZNF598-008) 1998424-2000071 nonsense_mediated_decay
ENST00000564824 (ZNF598-005) 1999500-2009764 retained_intron
ENST00000565396 (ZNF598-002) 1997655-2009795 retained_intron
ENST00000567008 (ZNF598-009) 1998153-1999195 retained_intron
ENST00000567625 (ZNF598-006) 2000010-2002345 nonsense_mediated_decay
ENSG00000261790 (AC005606.14)
 ENST00000564438 (AC005606.14-001) 1984877-1986853 lincRNA
ENST00000565041 (AC005606.14-002) 1986266-1990357 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029C_0001ENSDARG00000014871ENSDART00000011568ENSDARG00000014945ENSDART00000074757CIL_00029C_0002ENSG00000127561ENST00000248121ENST00000562045ENST00000563869ENST00000564642ENST00000568896ENST00000618464ENSG00000167962ENST00000431526ENST00000561787ENST00000562103ENST00000562988ENST00000563630ENST00000564556ENST00000564824ENST00000565396ENST00000567008ENST00000567625ENSG00000261790ENST00000564438ENST00000565041
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029C_0001ENSDARG00000014871ENSDART00000011568ENSDARG00000014945ENSDART00000074757CIL_00029C_0002ENSG00000127561ENST00000248121ENST00000562045ENST00000563869ENST00000564642ENST00000568896ENST00000618464ENSG00000167962ENST00000431526ENST00000561787ENST00000562103ENST00000562988ENST00000563630ENST00000564556ENST00000564824ENST00000565396ENST00000567008ENST00000567625ENSG00000261790ENST00000564438ENST00000565041
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014871 ENSDART00000011568 N/A N/A N/A 18.342±3.89 N/A N/A 0.205±0.11 0.285±0.04 0.177±0.00 N/A 1.828±0.00 N/A N/A N/A
ENSDARG00000014945 ENSDART00000074757 N/A N/A N/A 8.239±1.32 N/A N/A 4.155±1.85 3.611±2.53 4.700±0.00 N/A 4.672±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127561 ENST00000248121 N/A N/A N/A 11.470±0.00 N/A 1.426±0.00 N/A 0.336±0.00 N/A N/A N/A 0.213±0.06 1.124±0.78 0.648±0.00
ENST00000562045 N/A N/A N/A N/A 0.074±0.05 0.164±0.00 N/A N/A 0.036±0.02 0.216±0.00 N/A 0.052±0.00 N/A N/A
ENST00000563869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A
ENST00000564642 0.191±0.00 N/A 0.124±0.00 N/A N/A N/A 0.462±0.00 N/A N/A N/A 0.249±0.00 N/A N/A N/A
ENST00000568896 N/A N/A N/A N/A N/A 0.987±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618464 0.135±0.00 N/A N/A 8.659±4.47 0.042±0.00 1.181±0.00 N/A 0.779±0.47 0.034±0.00 0.766±0.00 0.034±0.00 0.440±0.00 2.805±2.24 N/A
ENSG00000167962 ENST00000431526 7.101±0.00 2.607±0.00 N/A 1.973±0.00 5.366±0.00 4.103±0.00 3.545±0.00 2.681±2.45 2.190±1.96 8.414±0.00 25.734±0.00 10.720±8.20 2.380±0.13 10.792±0.00
ENST00000561787 N/A N/A N/A 0.580±0.00 N/A N/A N/A 1.750±0.00 N/A N/A N/A N/A N/A N/A
ENST00000562103 N/A N/A 0.532±0.00 0.621±0.00 1.050±0.00 0.762±0.00 0.328±0.00 N/A 0.363±0.00 N/A 0.196±0.00 N/A 3.728±1.09 10.063±0.00
ENST00000562988 1.999±0.00 2.739±0.00 N/A N/A 0.413±0.00 1.545±0.00 N/A N/A 0.971±0.00 N/A N/A N/A N/A N/A
ENST00000563630 N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 0.225±0.00 N/A N/A 5.256±0.00 1.996±0.27 N/A
ENST00000564556 N/A N/A N/A N/A N/A N/A N/A N/A 2.036±0.00 N/A N/A N/A N/A N/A
ENST00000564824 N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565396 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A 1.291±0.00 N/A N/A
ENST00000567008 N/A N/A N/A N/A N/A 2.242±0.00 0.297±0.00 0.946±0.00 N/A N/A N/A 40.402±0.00 26.826±0.00 36.933±0.00
ENST00000567625 N/A N/A N/A N/A N/A N/A 0.519±0.00 0.652±0.00 N/A N/A N/A 0.493±0.00 N/A N/A
ENSG00000261790 ENST00000564438 2.090±0.00 N/A N/A N/A N/A N/A 2.554±0.00 3.686±0.00 3.297±0.00 1.629±1.10 4.299±0.00 2.060±0.00 N/A N/A
ENST00000565041 N/A N/A 0.543±0.00 N/A N/A N/A N/A 0.250±0.00 N/A N/A N/A N/A 4.371±0.00 N/A

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