C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptogyrin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618464 SYNGR3-201 ENSG00000127561 9606 + 16:1989999-1994267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENST00000618464
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000618464 0.135±0.00 8.659±4.47 0.042±0.00 1.181±0.00 0.779±0.47 0.034±0.00 0.766±0.00 0.034±0.00 0.440±0.00 2.805±2.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029B CIL_00029B_0002 CGP 16:1984207-1994275
CIL_00029C CIL_00029C_0002 CGP 16:1989660-2009823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007236 Syngr3-001 protein_coding Mus_musculus 0 307

Loading