C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002A6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018936-ENSDARG00000023160 CGP 7955 19:44599863-44619290
GeneTranscriptPositionBiotype
ENSDARG00000018936 (zcchc17)
zinc finger, CCHC domain containing 17
ENSDART00000098101 (zcchc17-001) 44599863-44607251 protein_coding
ENSDART00000122135 (zcchc17-201) 44599863-44607233 protein_coding
ENSDARG00000023160 (snrnp40)
small nuclear ribonucleoprotein 40 (U5)
ENSDART00000038230 (snrnp40-001) 44607303-44619290 protein_coding
ENSDARG00000083234 (CU207343.1)
ENSDART00000117761 (CU207343.1-201) 44617888-44617954 miRNA
CIL_0002A6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028772-ENSMUSG00000074088 CGP 10090 4:130315383-130390026
GeneTranscriptPositionBiotype
ENSMUSG00000028773 (Fabp3)
fatty acid binding protein 3, muscle and heart
ENSMUST00000070532 (Fabp3-001) 130308595-130315463 protein_coding
ENSMUSG00000074088 (Snrnp40)
small nuclear ribonucleoprotein 40 (U5)
ENSMUST00000105994 (Snrnp40-001) 130360132-130390026 protein_coding
ENSMUST00000180577 (Snrnp40-002) 130360194-130375576 processed_transcript
ENSMUST00000181161 (Snrnp40-004) 130362627-130365432 processed_transcript
ENSMUST00000181560 (Snrnp40-003) 130385022-130388628 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002A6_0001ENSDARG00000018936ENSDART00000098101ENSDART00000122135ENSDARG00000023160ENSDART00000038230ENSDARG00000083234ENSDART00000117761CIL_0002A6_0002ENSMUSG00000028773ENSMUST00000070532ENSMUSG00000074088ENSMUST00000105994ENSMUST00000180577ENSMUST00000181161ENSMUST00000181560
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002A6_0001ENSDARG00000018936ENSDART00000098101ENSDART00000122135ENSDARG00000023160ENSDART00000038230ENSDARG00000083234ENSDART00000117761CIL_0002A6_0002ENSMUSG00000028773ENSMUST00000070532ENSMUSG00000074088ENSMUST00000105994ENSMUST00000180577ENSMUST00000181161
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018936 ENSDART00000098101 N/A N/A N/A 5.349±1.62 N/A N/A 2.444±1.12 4.504±3.91 N/A N/A 1.726±0.00 N/A N/A N/A
ENSDART00000122135 N/A N/A N/A 5.434±3.60 N/A N/A 4.552±0.86 N/A 0.225±0.00 N/A N/A N/A N/A N/A
ENSDARG00000023160 ENSDART00000038230 N/A N/A N/A 2.468±2.41 N/A N/A 4.081±1.85 10.782±0.00 1.162±0.00 N/A 1.246±0.00 N/A N/A N/A
ENSDARG00000083234 ENSDART00000117761 N/A N/A N/A 62.313±0.00 N/A N/A N/A N/A 4.488±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028773 ENSMUST00000070532 12.173±7.97 9.673±1.43 9.067±0.91 62.440±29.32 39.963±8.16 N/A 2401.920±122.60 104.285±15.13 N/A 26.883±3.47 390.786±106.54 31.283±8.14 679.264±686.66 69.958±14.18
ENSMUSG00000074088 ENSMUST00000105994 17.235±5.55 12.714±1.40 14.962±2.29 26.038±14.95 13.703±2.05 14.303±2.89 7.993±0.31 11.741±0.29 22.452±19.58 13.026±1.40 6.569±0.32 25.538±3.27 25.058±10.47 15.416±5.64
ENSMUST00000180577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.152±0.56
ENSMUST00000181161 N/A N/A N/A 6.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.894±0.00
ENSMUST00000181560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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