C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002AE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038190-ENSDARG00000076197 CGP 7955 3:49744850-49774476
GeneTranscriptPositionBiotype
ENSDARG00000038190 (ndel1b)
nudE nuclear distribution gene E homolog like 1 (A. nidulans) B 		ENSDART00000055682 (ndel1b-001) 49744850-49772246 protein_coding
ENSDARG00000076197 (RNF222)
ring finger protein 222 		ENSDART00000109167 (RNF222-201) 49773859-49774476 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002AE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018736-ENSMUSG00000046490 CGP 10090 11:68821434-68895777
GeneTranscriptPositionBiotype
ENSMUSG00000018736 (Ndel1)
nuclear distribution gene E-like homolog 1 (A. nidulans) 		ENSMUST00000018880 (Ndel1-001) 68821434-68853135 protein_coding
ENSMUST00000101017 (Ndel1-003) 68829303-68871858 protein_coding
ENSMUST00000108672 (Ndel1-002) 68829318-68853041 protein_coding
ENSMUST00000127469 (Ndel1-006) 68839914-68864993 processed_transcript
ENSMUST00000143899 (Ndel1-004) 68822110-68839920 processed_transcript
ENSMUST00000144300 (Ndel1-005) 68836182-68859996 processed_transcript
ENSMUSG00000046490 (Rnf222)
ring finger protein 222 		ENSMUST00000065213 (Rnf222-001) 68888553-68895777 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AE_0001ENSDARG00000038190ENSDART00000055682ENSDARG00000076197ENSDART00000109167CIL_0002AE_0002ENSMUSG00000018736ENSMUST00000018880ENSMUST00000101017ENSMUST00000108672ENSMUST00000127469ENSMUST00000143899ENSMUST00000144300ENSMUSG00000046490ENSMUST00000065213
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AE_0001ENSDARG00000038190ENSDART00000055682ENSDARG00000076197ENSDART00000109167CIL_0002AE_0002ENSMUSG00000018736ENSMUST00000018880ENSMUST00000108672ENSMUST00000127469ENSMUST00000143899ENSMUST00000144300ENSMUSG00000046490ENSMUST00000065213
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038190 ENSDART00000055682 N/A N/A N/A 21.869±2.00 N/A N/A 12.063±4.48 18.268±1.85 11.254±0.00 N/A 27.945±0.00 N/A N/A N/A
ENSDARG00000076197 ENSDART00000109167 N/A N/A N/A 0.294±0.17 N/A N/A N/A 0.183±0.00 0.070±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018736 ENSMUST00000018880 14.632±2.81 52.019±2.75 21.983±2.79 18.335±5.08 13.673±1.24 19.207±7.50 8.485±1.06 28.967±3.95 16.500±4.22 21.115±5.47 8.272±5.93 23.378±4.78 23.825±10.53 33.376±15.25
ENSMUST00000101017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.959±0.00 N/A N/A
ENSMUST00000127469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.016±0.00 36.141±0.00 137.429±0.00
ENSMUST00000143899 8.894±0.25 51.290±9.55 10.235±0.00 N/A 15.451±3.99 17.766±3.80 6.465±0.63 13.840±0.00 5.570±0.45 13.085±2.76 10.170±2.48 23.565±6.75 20.106±9.73 N/A
ENSMUST00000144300 N/A N/A N/A 88.911±0.00 N/A N/A N/A N/A N/A N/A N/A 33.906±20.83 81.221±20.59 69.031±0.00
ENSMUSG00000046490 ENSMUST00000065213 0.017±0.00 0.215±0.06 0.006±0.00 0.021±0.01 0.069±0.04 0.038±0.00 0.044±0.02 0.054±0.03 0.061±0.03 0.422±0.33 0.038±0.02 0.092±0.08 0.504±0.70 0.640±0.06

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