C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear distribution gene E-like homolog 1 (A. nidulans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127469 Ndel1-006 ENSMUSG00000018736 10090 - 11:68839914-68864993 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000127469
Transcript ID Ovary Placenta Testis
ENSMUST00000127469 32.016±0.00 36.141±0.00 137.429±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088C CIL_00088C_0002 VISTA 11:68323475-68924174
CIL_0009AZ CIL_0009AZ_0002 VISTA 11:68337699-68940744
CIL_0002AE CIL_0002AE_0002 CGP 11:68821434-68895777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334527 NDEL1-001 protein_coding Homo_sapiens 0 798
ENST00000380025 NDEL1-003 protein_coding Homo_sapiens 0 798
ENST00000402554 NDEL1-002 protein_coding Homo_sapiens 0 798
ENST00000450604 RP13-313G19.2-001 processed_pseudogene Homo_sapiens 0 534
ENST00000579880 NDEL1-009 processed_transcript Homo_sapiens 0 298
ENST00000580012 NDEL1-014 protein_coding Homo_sapiens 0 322
ENST00000580237 NDEL1-010 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000580738 NDEL1-017 retained_intron Homo_sapiens 0 424
ENST00000581189 NDEL1-015 processed_transcript Homo_sapiens 0 536
ENST00000582490 NDEL1-013 protein_coding Homo_sapiens 0 388
ENST00000582665 NDEL1-011 protein_coding Homo_sapiens 0 784
ENST00000582812 NDEL1-007 protein_coding Homo_sapiens 0 730
ENST00000583066 NDEL1-016 processed_transcript Homo_sapiens 8.99998e-41 171
ENST00000584866 NDEL1-012 protein_coding Homo_sapiens 0 196
ENST00000585098 NDEL1-019 protein_coding Homo_sapiens 0 318

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