C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002AG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006859-ENSDARG00000023145 CGP 7955 19:44620667-44693855
GeneTranscriptPositionBiotype
ENSDARG00000006859 (nkain1)
Na+/K+ transporting ATPase interacting 1
ENSDART00000015632 (nkain1-001) 44620667-44634278 protein_coding
ENSDART00000132213 (nkain1-002) 44620826-44629727 protein_coding
ENSDART00000150901 (nkain1-003) 44627582-44630378 retained_intron
ENSDARG00000080694 (SNORA5)
Small nucleolar RNA SNORA5
ENSDART00000118516 (SNORA5.2-201) 44683820-44683955 snoRNA
ENSDARG00000093585 (si:ch211-285e16.3)
si:ch211-285e16.3
ENSDART00000133473 (si:ch211-285e16.3-001) 44632277-44633783 processed_transcript
CIL_0002AG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078532-ENSMUSG00000028580 CGP 10090 4:130531602-130781564
GeneTranscriptPositionBiotype
ENSMUSG00000028580 (Pum1)
pumilio RNA-binding family member 1
ENSMUST00000030315 (Pum1-001) 130663321-130781564 protein_coding
ENSMUST00000097862 (Pum1-004) 130663406-130780254 protein_coding
ENSMUST00000097864 (Pum1-003) 130663386-130780266 protein_coding
ENSMUST00000105991 (Pum1-201) 130663359-130781562 protein_coding
ENSMUST00000105992 (Pum1-202) 130663359-130781562 protein_coding
ENSMUST00000122847 (Pum1-002) 130663366-130718881 retained_intron
ENSMUST00000143277 (Pum1-005) 130663367-130747003 protein_coding
ENSMUSG00000078532 (Nkain1)
Na+/K+ transporting ATPase interacting 1
ENSMUST00000105993 (Nkain1-001) 130531618-130574173 protein_coding
ENSMUST00000180498 (Nkain1-003) 130539063-130557988 processed_transcript
ENSMUST00000180884 (Nkain1-002) 130531602-130573966 nonsense_mediated_decay
ENSMUSG00000087449 (Gm12971)
predicted gene 12971
ENSMUST00000154720 (Gm12971-001) 130758563-130762379 sense_intronic
ENSMUSG00000097158 (Gm26516)
predicted gene, 26516
ENSMUST00000180943 (Gm26516-201) 130774817-130779246 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AG_0001ENSDARG00000006859ENSDART00000015632ENSDART00000132213ENSDART00000150901ENSDARG00000080694ENSDART00000118516ENSDARG00000093585ENSDART00000133473CIL_0002AG_0002ENSMUSG00000028580ENSMUST00000030315ENSMUST00000097862ENSMUST00000097864ENSMUST00000105991ENSMUST00000105992ENSMUST00000122847ENSMUST00000143277ENSMUSG00000078532ENSMUST00000105993ENSMUST00000180498ENSMUST00000180884ENSMUSG00000087449ENSMUST00000154720ENSMUSG00000097158ENSMUST00000180943
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AG_0001ENSDARG00000006859ENSDART00000015632ENSDART00000150901ENSDARG00000080694ENSDART00000118516ENSDARG00000093585ENSDART00000133473CIL_0002AG_0002ENSMUSG00000028580ENSMUST00000030315ENSMUST00000097862ENSMUST00000097864ENSMUST00000105991ENSMUST00000105992ENSMUSG00000078532ENSMUST00000105993ENSMUST00000180884ENSMUSG00000087449ENSMUST00000154720ENSMUSG00000097158ENSMUST00000180943
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006859 ENSDART00000015632 N/A N/A N/A 21.614±1.87 N/A N/A 1.012±0.20 4.489±0.00 0.371±0.00 N/A 0.891±0.00 N/A N/A N/A
ENSDART00000132213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150901 N/A N/A N/A 0.574±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000080694 ENSDART00000118516 N/A N/A N/A 44.401±0.00 N/A N/A N/A 60.484±31.59 N/A N/A N/A N/A N/A N/A
ENSDARG00000093585 ENSDART00000133473 N/A N/A N/A 20.489±0.00 N/A N/A 1.373±0.00 N/A 0.260±0.00 N/A 0.874±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028580 ENSMUST00000030315 11.801±0.52 16.539±1.38 5.910±0.03 11.632±2.17 7.083±3.39 2.867±0.37 4.504±0.07 6.526±0.76 5.350±1.36 8.278±1.45 2.076±1.14 4.857±2.53 7.516±0.75 8.675±3.11
ENSMUST00000097862 8.056±0.00 11.917±2.61 N/A N/A 4.252±1.54 9.319±0.55 4.527±2.02 3.472±0.00 2.212±0.00 6.509±0.00 1.767±0.50 5.611±0.00 N/A 9.408±2.57
ENSMUST00000097864 11.562±4.98 10.574±3.54 2.923±0.40 7.530±2.20 9.133±3.75 7.290±2.13 5.760±0.37 6.927±1.69 4.326±2.09 8.031±0.40 1.596±0.00 13.393±2.92 6.311±4.14 13.991±2.17
ENSMUST00000105991 N/A N/A 5.065±0.34 13.183±3.56 N/A 4.182±0.00 2.293±0.00 3.578±0.00 4.565±0.58 N/A 1.112±0.25 5.261±0.00 5.661±0.30 N/A
ENSMUST00000105992 7.396±4.38 10.349±1.98 3.547±0.11 12.431±0.83 9.710±3.18 8.756±2.42 3.965±1.33 8.665±2.60 4.673±1.51 14.863±3.07 1.398±0.18 27.052±4.41 4.053±0.06 4.776±0.33
ENSMUST00000122847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078532 ENSMUST00000105993 2.654±0.00 2.143±0.76 N/A N/A 1.195±0.66 3.659±1.28 N/A 2.865±0.00 0.096±0.04 N/A N/A 4.205±2.01 N/A 2.456±1.44
ENSMUST00000180498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180884 N/A 3.165±0.78 N/A N/A 0.942±0.27 2.124±0.00 N/A N/A 0.140±0.07 1.543±0.00 N/A 3.297±0.50 N/A 0.416±0.00
ENSMUSG00000087449 ENSMUST00000154720 0.206±0.07 N/A 0.080±0.03 0.391±0.05 0.377±0.18 0.222±0.01 0.179±0.00 0.161±0.06 0.176±0.11 0.198±0.10 0.126±0.02 0.367±0.20 0.140±0.03 0.108±0.00
ENSMUSG00000097158 ENSMUST00000180943 0.637±0.11 0.382±0.17 0.713±0.10 1.136±0.49 0.877±0.20 0.706±0.31 0.175±0.10 0.389±0.07 0.547±0.27 0.508±0.17 0.118±0.06 1.189±0.57 0.722±0.20 0.186±0.06

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