C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pumilio RNA-binding family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143277 Pum1-005 ENSMUSG00000028580 10090 + 4:130663367-130747003 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AG CIL_0002AG_0002 CGP 4:130531602-130781564
CIL_0002AF CIL_0002AF_0002 CGP 4:130663321-130826319

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257075 PUM1-001 protein_coding Homo_sapiens 0 732
ENST00000373741 PUM1-002 protein_coding Homo_sapiens 0 784
ENST00000373742 PUM1-011 protein_coding Homo_sapiens 0 782
ENST00000373747 PUM1-004 protein_coding Homo_sapiens 0 732
ENST00000424085 PUM1-014 protein_coding Homo_sapiens 0 1068
ENST00000426105 PUM1-010 protein_coding Homo_sapiens 0 732
ENST00000440538 PUM1-013 protein_coding Homo_sapiens 0 732
ENST00000480602 PUM1-009 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000490546 PUM1-007 processed_transcript Homo_sapiens 9.99995e-41 171
ENST00000498419 PUM1-005 protein_coding Homo_sapiens 0 272
ENST00000524516 PUM1-017 retained_intron Homo_sapiens 0 730
ENST00000525843 PUM1-012 protein_coding Homo_sapiens 0 784
ENST00000525948 PUM1-015 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000526128 PUM1-019 processed_transcript Homo_sapiens 0 342
ENST00000526215 PUM1-016 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000531867 PUM1-020 protein_coding Homo_sapiens 0 532

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