C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002D0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148450-ENSG00000168267 CGP 9606 10:23095506-23194252
GeneTranscriptPositionBiotype
ENSG00000148450 (MSRB2)
methionine sulfoxide reductase B2 		ENST00000376510 (MSRB2-001) 23095506-23122013 protein_coding
ENST00000468633 (MSRB2-003) 23119144-23120893 processed_transcript
ENST00000472663 (MSRB2-002) 23104144-23120954 nonsense_mediated_decay
ENSG00000168267 (PTF1A)
pancreas specific transcription factor, 1a 		ENST00000376504 (PTF1A-001) 23192327-23194252 protein_coding
ENSG00000229932 (YWHAZP3)
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta pseudogene 3 		ENST00000415292 (YWHAZP3-001) 23136924-23137661 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0002D0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023094-ENSMUSG00000026735 CGP 10090 2:19371440-19447501
GeneTranscriptPositionBiotype
ENSMUSG00000023094 (Msrb2)
methionine sulfoxide reductase B2 		ENSMUST00000023856 (Msrb2-001) 19371636-19394976 protein_coding
ENSMUST00000126894 (Msrb2-002) 19371668-19393320 processed_transcript
ENSMUST00000137812 (Msrb2-004) 19371440-19383284 processed_transcript
ENSMUST00000153289 (Msrb2-003) 19371841-19394264 processed_transcript
ENSMUSG00000026735 (Ptf1a)
pancreas specific transcription factor, 1a 		ENSMUST00000028068 (Ptf1a-001) 19445663-19447501 protein_coding
ENSMUSG00000085388 (Ptf1aos)
pancreas specific transcription factor 1a, opposite strand 		ENSMUST00000122978 (Ptf1aos-001) 19441508-19446674 antisense
ENSMUSG00000087103 (Gm13344)
predicted gene 13344 		ENSMUST00000137714 (Gm13344-001) 19429104-19431983 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002D0_0001ENSG00000148450ENST00000376510ENST00000468633ENST00000472663ENSG00000168267ENST00000376504ENSG00000229932ENST00000415292CIL_0002D0_0002ENSMUSG00000023094ENSMUST00000023856ENSMUST00000126894ENSMUST00000137812ENSMUST00000153289ENSMUSG00000026735ENSMUST00000028068ENSMUSG00000085388ENSMUST00000122978ENSMUSG00000087103ENSMUST00000137714
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002D0_0001ENSG00000148450ENST00000376510ENST00000468633ENST00000472663ENSG00000168267ENST00000376504ENSG00000229932ENST00000415292CIL_0002D0_0002ENSMUSG00000023094ENSMUST00000023856ENSMUST00000126894ENSMUST00000153289ENSMUSG00000026735ENSMUST00000028068ENSMUSG00000085388ENSMUST00000122978ENSMUSG00000087103ENSMUST00000137714
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148450 ENST00000376510 2.693±0.00 2.621±0.00 0.650±0.00 2.056±0.68 3.692±2.81 3.411±2.11 6.207±4.57 2.390±1.15 2.178±0.52 2.480±1.71 2.408±0.41 4.526±3.51 5.051±1.82 1.512±0.73
ENST00000468633 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.233±0.00 8.244±0.00 N/A N/A N/A
ENST00000472663 6.984±0.00 10.432±0.00 N/A 9.962±7.79 31.292±0.00 24.535±0.00 53.651±0.00 14.262±11.95 31.399±0.00 21.025±0.00 16.935±0.00 15.401±4.36 18.578±5.74 8.211±5.81
ENSG00000168267 ENST00000376504 N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A 1.258±0.65
ENSG00000229932 ENST00000415292 0.196±0.00 0.131±0.00 N/A 0.136±0.09 0.056±0.00 0.069±0.00 0.034±0.00 0.094±0.00 0.017±0.00 0.018±0.00 N/A 0.213±0.17 0.056±0.00 0.081±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023094 ENSMUST00000023856 24.402±5.45 14.000±2.42 12.697±2.14 5.627±4.65 11.152±3.21 3.340±0.75 41.012±1.13 26.122±0.78 8.515±2.03 11.199±0.99 9.046±1.06 19.509±6.44 1.568±0.64 3.829±0.49
ENSMUST00000126894 N/A 4.650±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.705±0.00 N/A
ENSMUST00000137812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153289 N/A N/A N/A 21.864±0.00 N/A N/A N/A N/A N/A N/A N/A 49.132±0.00 5.248±1.30 N/A
ENSMUSG00000026735 ENSMUST00000028068 0.054±0.00 N/A N/A 0.201±0.16 N/A 0.981±0.14 N/A N/A 0.027±0.03 0.017±0.00 N/A 0.044±0.00 N/A 0.030±0.01
ENSMUSG00000085388 ENSMUST00000122978 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087103 ENSMUST00000137714 0.021±0.00 N/A 0.011±0.00 0.204±0.27 N/A 0.043±0.00 0.039±0.01 N/A 0.004±0.00 0.030±0.00 0.039±0.00 0.038±0.03 N/A N/A

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