C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002IB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198843-ENSG00000163645 CGP 9606 3:150602875-150703971
GeneTranscriptPositionBiotype
ENSG00000120742 (SERP1)
stress-associated endoplasmic reticulum protein 1 		ENST00000239944 (SERP1-201) 150541994-150546641 protein_coding
ENST00000463647 (SERP1-007) 150566385-150583155 processed_transcript
ENST00000479209 (SERP1-001) 150541998-150603174 protein_coding
ENST00000484608 (SERP1-006) 150566799-150603168 processed_transcript
ENST00000487153 (SERP1-009) 150544292-150546501 protein_coding
ENST00000490945 (SERP1-005) 150565796-150603228 processed_transcript
ENST00000491195 (SERP1-008) 150546790-150603170 processed_transcript
ENST00000491660 (SERP1-011) 150545397-150546499 protein_coding
ENSG00000163645 (ERICH6)
glutamate-rich 6 		ENST00000295910 (ERICH6-001) 150659885-150703951 protein_coding
ENST00000474463 (ERICH6-006) 150686338-150703932 protein_coding
ENST00000491361 (ERICH6-002) 150659885-150703958 protein_coding
ENST00000491716 (ERICH6-004) 150659885-150682319 retained_intron
ENST00000498386 (ERICH6-005) 150698818-150703971 protein_coding
ENSG00000271711 (RP11-392O18.2)
 ENST00000604339 (RP11-392O18.2-001) 150611262-150611877 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0002IB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075700-ENSMUSG00000070471 CGP 10090 3:58576636-58637207
GeneTranscriptPositionBiotype
ENSMUSG00000070471 (Erich6)
glutamate rich 6 		ENSMUST00000041115 (Erich6-201) 58616300-58637207 protein_coding
ENSMUSG00000075700 (Selt)
selenoprotein T 		ENSMUST00000107924 (Selt-001) 58576636-58593133 protein_coding
ENSMUST00000125815 (Selt-002) 58576698-58588812 retained_intron

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IB_0001ENSG00000120742ENST00000239944ENST00000463647ENST00000479209ENST00000484608ENST00000487153ENST00000490945ENST00000491195ENST00000491660ENSG00000163645ENST00000295910ENST00000474463ENST00000491361ENST00000491716ENST00000498386ENSG00000271711ENST00000604339CIL_0002IB_0002ENSMUSG00000070471ENSMUST00000041115ENSMUSG00000075700ENSMUST00000107924ENSMUST00000125815
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IB_0001ENSG00000120742ENST00000239944ENST00000479209ENST00000487153ENSG00000163645ENST00000295910ENST00000491361ENST00000491716ENST00000498386ENSG00000271711ENST00000604339CIL_0002IB_0002ENSMUSG00000070471ENSMUST00000041115ENSMUSG00000075700ENSMUST00000107924ENSMUST00000125815
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120742 ENST00000239944 32.148±0.00 26.851±0.00 3.703±0.00 21.452±7.59 23.277±8.82 25.545±14.26 4.971±2.96 34.245±15.29 21.965±13.54 31.458±15.95 N/A 24.770±10.29 35.896±6.87 29.607±12.75
ENST00000463647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479209 N/A N/A 1.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487153 N/A N/A N/A N/A N/A N/A N/A N/A 147.646±0.00 N/A N/A N/A N/A N/A
ENST00000490945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163645 ENST00000295910 N/A N/A N/A 0.052±0.00 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A 9.423±0.00
ENST00000474463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491361 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A 15.761±0.00
ENST00000491716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.544±0.00
ENST00000498386 0.212±0.00 N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.057±0.00 N/A
ENSG00000271711 ENST00000604339 0.073±0.00 0.199±0.00 0.063±0.00 N/A 0.649±0.00 N/A 0.124±0.08 N/A 0.263±0.00 0.415±0.00 N/A N/A N/A 0.022±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000070471 ENSMUST00000041115 0.089±0.06 0.076±0.03 0.039±0.02 0.270±0.00 0.063±0.01 0.054±0.01 0.081±0.05 0.074±0.03 0.019±0.01 0.105±0.08 0.018±0.00 0.276±0.18 0.021±0.01 23.703±7.94
ENSMUSG00000075700 ENSMUST00000107924 32.600±2.79 41.518±4.90 29.281±1.00 19.974±1.44 33.096±2.37 24.590±3.91 27.485±1.21 61.273±4.48 34.961±9.00 37.466±1.96 37.450±2.00 27.873±5.98 27.614±12.66 17.668±7.43
ENSMUST00000125815 N/A 67.370±22.41 N/A N/A N/A 12.216±0.89 N/A N/A N/A N/A N/A 22.396±4.46 N/A N/A

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