C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125815 Selt-002 ENSMUSG00000075700 10090 + 3:58576698-58588812 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000125815
Transcript ID Adrenal Colon Ovary
ENSMUST00000125815 67.370±22.41 12.216±0.89 22.396±4.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IA CIL_0002IA_0002 CGP 3:58525821-58593133
CIL_0002IB CIL_0002IB_0002 CGP 3:58576636-58637207

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000456723 RP11-307L3.2-001 processed_pseudogene Homo_sapiens 0 568
ENST00000471696 SELT-001 protein_coding Homo_sapiens 0 765
ENST00000477889 SELT-003 protein_coding Homo_sapiens 0 531
ENST00000480740 SELT-002 protein_coding Homo_sapiens 0 531
ENST00000485923 SELT-005 protein_coding Homo_sapiens 0 532
ENST00000492132 SELT-004 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000615547 SELT-201 protein_coding Homo_sapiens 0 737
ENST00000619570 SELT-202 protein_coding Homo_sapiens 0 745

Loading