C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selenoprotein T
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075700 Selt 10090 + 3:58576636-58593133 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000107924 Selt-001 58576636-58593133 protein_coding
  ENSMUST00000125815 Selt-002 58576698-58588812 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107924ENSMUST00000125815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107924 32.600±2.79 41.518±4.90 29.281±1.00 19.974±1.44 33.096±2.37 24.590±3.91 27.485±1.21 61.273±4.48 34.961±9.00 37.466±1.96 37.450±2.00 27.873±5.98 27.614±12.66 17.668±7.43
ENSMUST00000125815 N/A 67.370±22.41 N/A N/A N/A 12.216±0.89 N/A N/A N/A N/A N/A 22.396±4.46 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IA CIL_0002IA_0002 CGP 3:58525821-58593133
CIL_0002IB CIL_0002IB_0002 CGP 3:58576636-58637207

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0008430 IEA selenium binding
GO:0009749 IMP response to glucose
GO:0031016 IMP pancreas development
GO:0035773 IMP insulin secretion involved in cellular response to glucose stimulus
GO:0042593 IMP glucose homeostasis
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027595 selt1b selenoprotein T, 1b protein_coding Danio_rerio
ENSDARG00000058354 selt1a selenoprotein T, 1a protein_coding Danio_rerio
ENSG00000198843 SELT selenoprotein T precursor protein_coding Homo_sapiens

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