C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002KN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010073-ENSDARG00000040581 CGP 7955 Zv9_scaffold3562:17222-120468
GeneTranscriptPositionBiotype
ENSDARG00000010073 (rab3ip)
RAB3A interacting protein (rabin3) 		ENSDART00000059404 (rab3ip-201) 17222-54526 protein_coding
ENSDARG00000040581 (MYRFL)
myelin regulatory factor-like 		ENSDART00000059397 (MYRFL-201) 68377-120468 protein_coding
CIL_0002KN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000258052-ENSG00000166268 CGP 9606 12:69801669-69959097
GeneTranscriptPositionBiotype
ENSG00000127328 (RAB3IP)
RAB3A interacting protein 		ENST00000247833 (RAB3IP-003) 69738681-69817377 protein_coding
ENST00000362025 (RAB3IP-002) 69739400-69815723 protein_coding
ENST00000378809 (RAB3IP-009) 69739400-69815681 nonsense_mediated_decay
ENST00000378815 (RAB3IP-006) 69738862-69796647 protein_coding
ENST00000417413 (RAB3IP-005) 69738862-69815723 nonsense_mediated_decay
ENST00000481897 (RAB3IP-007) 69812045-69817377 retained_intron
ENST00000483530 (RAB3IP-004) 69738862-69815723 protein_coding
ENST00000526994 (RAB3IP-016) 69795262-69815725 protein_coding
ENST00000547055 (RAB3IP-015) 69756523-69785016 protein_coding
ENST00000547591 (RAB3IP-013) 69755382-69795216 nonsense_mediated_decay
ENST00000549760 (RAB3IP-012) 69739109-69756650 protein_coding
ENST00000550536 (RAB3IP-001) 69739390-69823204 protein_coding
ENST00000550647 (RAB3IP-014) 69756486-69812834 protein_coding
ENST00000550847 (RAB3IP-017) 69796573-69815550 protein_coding
ENST00000551641 (RAB3IP-008) 69778950-69817181 protein_coding
ENST00000552199 (RAB3IP-010) 69739408-69815723 nonsense_mediated_decay
ENST00000552610 (RAB3IP-018) 69812711-69815684 retained_intron
ENST00000553099 (RAB3IP-011) 69778967-69817117 protein_coding
ENSG00000257241 (RP11-611E13.3)
 ENST00000547547 (RP11-611E13.3-001) 69946543-69947081 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KN_0001ENSDARG00000010073ENSDART00000059404ENSDARG00000040581ENSDART00000059397CIL_0002KN_0002ENSG00000127328ENST00000247833ENST00000362025ENST00000378809ENST00000378815ENST00000417413ENST00000481897ENST00000483530ENST00000526994ENST00000547055ENST00000547591ENST00000549760ENST00000550536ENST00000550647ENST00000550847ENST00000551641ENST00000552199ENST00000552610ENST00000553099ENSG00000257241ENST00000547547
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KN_0001ENSDARG00000010073ENSDART00000059404ENSDARG00000040581ENSDART00000059397CIL_0002KN_0002ENSG00000127328ENST00000247833ENST00000378815ENST00000417413ENST00000483530ENST00000526994ENST00000547591ENST00000549760ENST00000550536ENST00000550847ENST00000551641ENSG00000257241ENST00000547547
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010073 ENSDART00000059404 N/A N/A N/A 13.768±9.47 N/A N/A 3.658±3.08 N/A 1.666±0.00 N/A 5.983±0.00 N/A N/A N/A
ENSDARG00000040581 ENSDART00000059397 N/A N/A N/A 0.030±0.01 N/A N/A 0.059±0.00 N/A N/A N/A 0.404±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127328 ENST00000247833 N/A N/A N/A N/A 0.617±0.00 N/A N/A N/A N/A 2.669±0.00 N/A 0.478±0.00 N/A N/A
ENST00000362025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378815 N/A N/A 5.513±0.00 N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A 1.785±0.00 N/A N/A
ENST00000417413 N/A N/A N/A 3.750±0.00 1.346±0.00 N/A N/A N/A 1.313±0.00 N/A N/A N/A N/A N/A
ENST00000481897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483530 1.404±0.00 N/A N/A N/A N/A 1.574±0.00 1.737±0.00 N/A N/A 4.496±0.00 1.240±0.00 1.698±0.00 1.250±0.40 10.804±0.63
ENST00000526994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.924±0.00 N/A
ENST00000547055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.546±0.00 11.506±0.00 63.240±0.00
ENST00000549760 N/A N/A N/A N/A N/A N/A 8.952±0.00 1.775±0.00 N/A N/A 4.618±0.00 N/A N/A 71.224±0.00
ENST00000550536 N/A N/A 2.978±0.00 0.655±0.05 N/A N/A 0.676±0.00 3.956±0.00 0.301±0.04 0.699±0.00 0.077±0.00 0.698±0.51 0.327±0.12 1.610±0.00
ENST00000550647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550847 N/A 2.874±0.00 N/A N/A N/A N/A N/A 2.048±0.00 4.211±0.00 N/A N/A N/A N/A 17.710±0.00
ENST00000551641 N/A N/A N/A N/A 0.324±0.00 N/A N/A 0.245±0.00 N/A N/A N/A 2.098±0.00 0.909±0.73 N/A
ENST00000552199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257241 ENST00000547547 N/A 0.063±0.00 N/A N/A 0.062±0.00 N/A N/A 0.437±0.00 N/A N/A N/A N/A N/A 0.071±0.00

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