C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3A interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378815 RAB3IP-006 ENSG00000127328 9606 + 12:69738862-69796647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyOvaryENST00000378815
Transcript ID Bladder Kidney Ovary
ENST00000378815 5.513±0.00 0.266±0.00 1.785±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005813 IDA centrosome
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0006612 IDA protein targeting to membrane
GO:0006893 TAS Golgi to plasma membrane transport
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0033365 IMP protein localization to organelle
GO:0036064 TAS ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000162527 Nup43-002 retained_intron Mus_musculus 0.0000009 60
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000003 58

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