C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3A interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550536 RAB3IP-001 ENSG00000127328 9606 + 12:69739390-69823204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000550536
Transcript ID Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000550536 2.978±0.00 0.655±0.05 0.676±0.00 3.956±0.00 0.301±0.04 0.699±0.00 0.077±0.00 0.698±0.51 0.327±0.12 1.610±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005813 IDA centrosome
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0006612 IDA protein targeting to membrane
GO:0006893 TAS Golgi to plasma membrane transport
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0033365 IMP protein localization to organelle
GO:0036064 TAS ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020375 Rab3ip-201 protein_coding Mus_musculus 0 937

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