C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002L4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012949-ENSDARG00000015240 CGP 7955 11:30982901-31107078
GeneTranscriptPositionBiotype
ENSDARG00000012949 (SCML2)
sex comb on midleg-like 2 (Drosophila) 		ENSDART00000006669 (SCML2-201) 30982901-31027032 protein_coding
ENSDART00000155278 (SCML2-002) 31026692-31033645 protein_coding
ENSDART00000156121 (SCML2-001) 31023289-31033675 protein_coding
ENSDART00000156196 (SCML2-003) 31029272-31031289 processed_transcript
CIL_0002L4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102098-ENSG00000008086 CGP 9606 X:18239314-18653629
GeneTranscriptPositionBiotype
ENSG00000102098 (SCML2)
sex comb on midleg-like 2 (Drosophila) 		ENST00000251900 (SCML2-001) 18239314-18354727 protein_coding
ENST00000398048 (SCML2-201) 18239318-18246755 protein_coding
ENST00000420857 (SCML2-002) 18239314-18247885 protein_coding
ENST00000491988 (SCML2-003) 18239385-18241225 processed_transcript
ENSG00000236187 (GJA6P)
gap junction protein, alpha 6, pseudogene 		ENST00000415117 (GJA6P-001) 18535079-18536120 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002L4_0001ENSDARG00000012949ENSDART00000006669ENSDART00000155278ENSDART00000156121ENSDART00000156196CIL_0002L4_0002ENSG00000102098ENST00000251900ENST00000398048ENST00000420857ENST00000491988ENSG00000236187ENST00000415117
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002L4_0001ENSDARG00000012949ENSDART00000006669ENSDART00000155278ENSDART00000156121CIL_0002L4_0002ENSG00000102098ENST00000251900ENST00000398048ENST00000420857ENST00000491988ENSG00000236187ENST00000415117
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012949 ENSDART00000006669 N/A N/A N/A N/A N/A N/A 0.962±0.00 N/A 0.069±0.00 N/A N/A N/A N/A N/A
ENSDART00000155278 N/A N/A N/A N/A N/A N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A
ENSDART00000156121 N/A N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102098 ENST00000251900 0.052±0.00 0.189±0.00 N/A 0.077±0.00 0.141±0.00 0.087±0.00 0.100±0.05 0.095±0.03 0.252±0.05 0.044±0.02 0.055±0.00 0.290±0.00 0.185±0.05 1.442±0.00
ENST00000398048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.448±0.00 N/A 0.211±0.00 N/A
ENST00000420857 N/A N/A N/A 0.112±0.00 N/A N/A 0.040±0.00 0.083±0.05 N/A 0.044±0.00 0.052±0.00 0.291±0.12 0.185±0.04 N/A
ENST00000491988 N/A N/A N/A N/A 0.189±0.00 0.268±0.08 0.190±0.00 N/A N/A 0.068±0.00 N/A 1.245±0.02 1.896±1.54 9.969±7.88
ENSG00000236187 ENST00000415117 N/A N/A 0.062±0.00 0.082±0.05 N/A N/A 0.248±0.24 0.080±0.00 N/A 0.103±0.00 N/A 0.136±0.08 0.032±0.00 0.032±0.00

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