C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sex comb on midleg-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398048 SCML2-201 ENSG00000102098 9606 - X:18239318-18246755 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENST00000398048
Transcript ID Muscle Placenta
ENST00000398048 0.448±0.00 0.211±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002L4 CIL_0002L4_0002 CGP X:18239314-18653629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009653 TAS anatomical structure morphogenesis
GO:0031519 IDA PcG protein complex
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077375 Scml2-003 protein_coding Mus_musculus 0 255

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