C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sex comb on midleg-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251900 SCML2-001 ENSG00000102098 9606 - X:18239314-18354727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251900
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251900 0.052±0.00 0.189±0.00 0.077±0.00 0.141±0.00 0.087±0.00 0.100±0.05 0.095±0.03 0.252±0.05 0.044±0.02 0.055±0.00 0.290±0.00 0.185±0.05 1.442±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002L4 CIL_0002L4_0002 CGP X:18239314-18653629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009653 TAS anatomical structure morphogenesis
GO:0031519 IDA PcG protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112345 Scml2-201 protein_coding Mus_musculus 0 496
ENSMUST00000101113 Scml2-005 protein_coding Mus_musculus 0 496
ENSMUST00000087090 Scml2-004 protein_coding Mus_musculus 0 496
ENSMUST00000077375 Scml2-003 protein_coding Mus_musculus 0 496
ENSMUST00000019101 Scml2-002 protein_coding Mus_musculus 0 496
ENSMUST00000074802 Scml2-001 protein_coding Mus_musculus 0 496

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