C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002LR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089461-ENSDARG00000009281 CGP 7955 5:66916358-67009337
GeneTranscriptPositionBiotype
ENSDARG00000009281 (dnm1b)
dynamin 1b 		ENSDART00000097330 (dnm1b-201) 66937070-67009337 protein_coding
ENSDART00000134261 (dnm1b-001) 66936929-67003805 protein_coding
ENSDART00000140280 (dnm1b-002) 66962999-66988901 processed_transcript
ENSDARG00000081800 (CU929237.1)
 ENSDART00000116849 (CU929237.1-201) 66977798-66977889 miRNA
ENSDARG00000089461 (ciz1b)
cdkn1a interacting zinc finger protein 1b 		ENSDART00000111403 (ciz1b-001) 66916358-66932005 protein_coding
ENSDARG00000097279 (si:ch73-274k23.3)
si:ch73-274k23.3 		ENSDART00000153730 (si:ch73-274k23.3-001) 67008057-67009331 lincRNA

Danio rerio Ensembl (Zv9)

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CIL_0002LR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089781-ENSDARG00000010042 CGP 7955 5:1564179-1741137
GeneTranscriptPositionBiotype
ENSDARG00000010042 (dnm1a)
dynamin 1a 		ENSDART00000026535 (dnm1a-201) 1597382-1726668 protein_coding
ENSDART00000147972 (dnm1a-001) 1597302-1741137 protein_coding
ENSDARG00000089781 (ciz1a)
cdkn1a interacting zinc finger protein 1a 		ENSDART00000125247 (ciz1a-001) 1566928-1594021 protein_coding
ENSDART00000135416 (ciz1a-002) 1570190-1583560 protein_coding
ENSDART00000154344 (ciz1a-201) 1564179-1590689 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002LR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148337-ENSG00000106976 CGP 9606 9:128166064-128255248
GeneTranscriptPositionBiotype
ENSG00000106976 (DNM1)
dynamin 1 		ENST00000341179 (DNM1-009) 128203379-128255237 protein_coding
ENST00000372923 (DNM1-001) 128203379-128255248 protein_coding
ENST00000393594 (DNM1-002) 128203417-128255239 protein_coding
ENST00000441149 (DNM1-004) 128218269-128251244 retained_intron
ENST00000463998 (DNM1-011) 128233564-128239783 retained_intron
ENST00000475805 (DNM1-007) 128203379-128254162 protein_coding
ENST00000482638 (DNM1-012) 128222529-128242267 nonsense_mediated_decay
ENST00000486160 (DNM1-010) 128203446-128255237 protein_coding
ENST00000493925 (DNM1-006) 128240752-128247387 processed_transcript

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LR_0001ENSDARG00000009281ENSDART00000097330ENSDART00000134261ENSDART00000140280ENSDARG00000081800ENSDART00000116849ENSDARG00000089461ENSDART00000111403ENSDARG00000097279ENSDART00000153730CIL_0002LR_0002ENSDARG00000010042ENSDART00000026535ENSDART00000147972ENSDARG00000089781ENSDART00000125247ENSDART00000135416ENSDART00000154344CIL_0002LR_0003ENSG00000106976ENST00000341179ENST00000372923ENST00000393594ENST00000441149ENST00000463998ENST00000475805ENST00000482638ENST00000486160ENST00000493925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LR_0001ENSDARG00000009281ENSDART00000097330ENSDART00000134261ENSDART00000140280ENSDARG00000081800ENSDART00000116849ENSDARG00000089461ENSDART00000111403ENSDARG00000097279ENSDART00000153730CIL_0002LR_0002ENSDARG00000010042ENSDART00000026535ENSDART00000147972ENSDARG00000089781ENSDART00000125247ENSDART00000154344CIL_0002LR_0003ENSG00000106976ENST00000341179ENST00000372923ENST00000393594ENST00000463998ENST00000475805ENST00000482638ENST00000486160
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009281 ENSDART00000097330 N/A N/A N/A 19.195±6.80 N/A N/A 0.025±0.01 0.132±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000134261 N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A 0.422±0.00 N/A N/A N/A
ENSDART00000140280 N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000081800 ENSDART00000116849 N/A N/A N/A 315.883±0.00 N/A N/A N/A 414.432±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000089461 ENSDART00000111403 N/A N/A N/A 1.382±0.93 N/A N/A 1.273±0.00 3.136±0.00 0.170±0.00 N/A 0.526±0.00 N/A N/A N/A
ENSDARG00000097279 ENSDART00000153730 N/A N/A N/A 20.491±7.99 N/A N/A 0.218±0.00 0.094±0.00 0.092±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010042 ENSDART00000026535 N/A N/A N/A 31.911±0.00 N/A N/A N/A N/A 0.012±0.00 N/A 1.460±0.00 N/A N/A N/A
ENSDART00000147972 N/A N/A N/A N/A N/A N/A 0.030±0.02 0.030±0.00 0.026±0.00 N/A 0.408±0.00 N/A N/A N/A
ENSDARG00000089781 ENSDART00000125247 N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154344 N/A N/A N/A 0.447±0.32 N/A N/A 0.654±0.00 0.543±0.00 0.171±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106976 ENST00000341179 N/A N/A N/A 68.551±0.00 N/A N/A 0.542±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000372923 6.213±0.00 1.425±0.00 0.252±0.00 N/A 1.704±0.00 1.188±0.00 0.696±0.00 3.094±0.00 0.346±0.12 0.965±0.00 N/A 2.091±0.50 1.076±0.60 1.082±0.65
ENST00000393594 N/A N/A N/A 12.373±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463998 N/A N/A N/A N/A N/A N/A N/A N/A 3.225±0.00 N/A N/A N/A N/A N/A
ENST00000475805 N/A N/A N/A N/A 0.377±0.00 1.806±0.00 N/A 0.081±0.00 N/A N/A N/A 0.256±0.00 N/A N/A
ENST00000482638 N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A
ENST00000486160 N/A N/A N/A 180.174±0.00 N/A N/A N/A N/A N/A 0.322±0.00 0.608±0.00 N/A N/A N/A
ENST00000493925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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