C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynamin 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000026535 dnm1a-201 ENSDARG00000010042 7955 + 5:1597382-1726668 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000026535
Transcript ID Brain Liver Muscle
ENSDART00000026535 31.911±0.00 0.012±0.00 1.460±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LR CIL_0002LR_0002 CGP 5:1564179-1741137
CIL_0002LS CIL_0002LS_0001 CGP 5:1597302-1806472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005874 IEA microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070330 Dnm3-006 protein_coding Mus_musculus 0 996
ENSMUST00000086074 Dnm3-001 protein_coding Mus_musculus 0 996
ENSMUST00000159763 Dnm3-003 protein_coding Mus_musculus 0 231
ENSMUST00000160665 Dnm3-004 protein_coding Mus_musculus 0 231
ENSMUST00000161539 Dnm3-005 processed_transcript Mus_musculus 9e-39 167
ENST00000341179 DNM1-009 protein_coding Homo_sapiens 0 1862
ENST00000355667 DNM2-001 protein_coding Homo_sapiens 0 1225
ENST00000359692 DNM2-002 protein_coding Homo_sapiens 0 1192
ENST00000372923 DNM1-001 protein_coding Homo_sapiens 0 1862
ENST00000389253 DNM2-010 protein_coding Homo_sapiens 0 1164
ENST00000393594 DNM1-002 protein_coding Homo_sapiens 0 1768
ENST00000408974 DNM2-003 protein_coding Homo_sapiens 0 1131
ENST00000441149 DNM1-004 retained_intron Homo_sapiens 0 1352
ENST00000463998 DNM1-011 retained_intron Homo_sapiens 2e-37 159
ENST00000475805 DNM1-007 protein_coding Homo_sapiens 0 1768
ENST00000482638 DNM1-012 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000486160 DNM1-010 protein_coding Homo_sapiens 0 1768
ENST00000585892 DNM2-006 protein_coding Homo_sapiens 0 1225
ENST00000590787 DNM2-009 retained_intron Homo_sapiens 0 291
ENST00000590806 DNM2-008 retained_intron Homo_sapiens 0 291

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