C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynamin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372923 DNM1-001 ENSG00000106976 9606 + 9:128203379-128255248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000372923
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000372923 6.213±0.00 1.425±0.00 0.252±0.00 1.704±0.00 1.188±0.00 0.696±0.00 3.094±0.00 0.346±0.12 0.965±0.00 2.091±0.50 1.076±0.60 1.082±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LU CIL_0002LU_0002 CGP 9:128160260-128204383
CIL_0002LR CIL_0002LR_0003 CGP 9:128166064-128255248
CIL_0002LS CIL_0002LS_0002 CGP 9:128203379-128275995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0006897 TAS endocytosis
GO:0006898 IMP receptor-mediated endocytosis
GO:0007032 IMP endosome organization
GO:0008022 IEA protein C-terminus binding
GO:0019901 ISS protein kinase binding
GO:0030117 IEA membrane coat
GO:0031623 IEA receptor internalization
GO:0032403 IEA protein complex binding
GO:0042802 IPI identical protein binding
GO:0043234 IEA protein complex
GO:0044822 IDA poly(A) RNA binding
GO:0050998 IEA nitric-oxide synthase binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113365 Dnm1-001 protein_coding Mus_musculus 0 4156
ENSMUST00000139624 Dnm1-006 nonsense_mediated_decay Mus_musculus 0 3696
ENSMUST00000113350 Dnm1-004 protein_coding Mus_musculus 0 3692
ENSMUST00000113352 Dnm1-002 protein_coding Mus_musculus 0 3685
ENSMUST00000091089 Dnm1-005 protein_coding Mus_musculus 0 3615
ENSMUST00000078352 Dnm1-003 protein_coding Mus_musculus 0 3487
ENSDART00000147972 dnm1a-001 protein_coding Danio_rerio 0 1908
ENSDART00000026535 dnm1a-201 protein_coding Danio_rerio 0 1862
ENSMUST00000165766 Dnm2-001 protein_coding Mus_musculus 0 1604
ENSMUST00000172482 Dnm2-008 protein_coding Mus_musculus 0 1600
ENSDART00000134261 dnm1b-001 protein_coding Danio_rerio 0 1591
ENSMUST00000115404 Dnm2-201 protein_coding Mus_musculus 0 1587
ENSMUST00000091087 Dnm2-005 protein_coding Mus_musculus 0 1570
ENSDART00000097330 dnm1b-201 protein_coding Danio_rerio 0 1567
ENSMUST00000072362 Dnm2-004 protein_coding Mus_musculus 0 1559
ENSMUST00000173397 Dnm2-003 protein_coding Mus_musculus 0 1559
ENSMUST00000174050 Dnm2-002 protein_coding Mus_musculus 0 1395
ENSMUST00000129156 Dnm1-013 nonsense_mediated_decay Mus_musculus 0 1271
ENSMUST00000156866 Dnm1-008 processed_transcript Mus_musculus 0 1158
ENSDART00000024031 dnm2a-001 protein_coding Danio_rerio 0 1107
ENSMUST00000086074 Dnm3-001 protein_coding Mus_musculus 0 1085
ENSMUST00000070330 Dnm3-006 protein_coding Mus_musculus 0 963
ENSDART00000152641 dnm3-001 protein_coding Danio_rerio 0 839
ENSDART00000047039 dnm3-201 protein_coding Danio_rerio 0 835
ENSMUST00000139291 Dnm1-010 protein_coding Mus_musculus 0 684
ENSMUST00000172763 Dnm2-006 retained_intron Mus_musculus 0 625
ENSMUST00000141633 Dnm1-009 retained_intron Mus_musculus 0 558
ENSMUST00000139238 Dnm1-007 nonsense_mediated_decay Mus_musculus 0 544
ENSMUST00000173299 Dnm2-011 retained_intron Mus_musculus 0 472
ENSMUST00000161155 Dnm3-002 retained_intron Mus_musculus 0 466
ENSDART00000140280 dnm1b-002 processed_transcript Danio_rerio 0 335
ENSMUST00000145885 Dnm1-011 retained_intron Mus_musculus 0 233
ENSMUST00000155269 Dnm1-012 protein_coding Mus_musculus 0 219

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