C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002LS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010042-ENSDARG00000063197 CGP 7955 5:1597302-1806472
GeneTranscriptPositionBiotype
ENSDARG00000010042 (dnm1a)
dynamin 1a 		ENSDART00000026535 (dnm1a-201) 1597382-1726668 protein_coding
ENSDART00000147972 (dnm1a-001) 1597302-1741137 protein_coding
ENSDARG00000063197 (golga2)
golgi autoantigen, golgin subfamily a, 2 		ENSDART00000092087 (golga2-001) 1751284-1806472 protein_coding
ENSDART00000128274 (golga2-201) 1751678-1806436 protein_coding
ENSDART00000144156 (golga2-002) 1773596-1776040 retained_intron
ENSDART00000148411 (golga2-005) 1787671-1806469 protein_coding
ENSDART00000148464 (golga2-004) 1783823-1806472 protein_coding
ENSDART00000149599 (golga2-006) 1783501-1806466 protein_coding
ENSDART00000150027 (golga2-003) 1779573-1783645 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0002LS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106976-ENSG00000167110 CGP 9606 9:128203379-128275995
GeneTranscriptPositionBiotype
ENSG00000106976 (DNM1)
dynamin 1 		ENST00000341179 (DNM1-009) 128203379-128255237 protein_coding
ENST00000372923 (DNM1-001) 128203379-128255248 protein_coding
ENST00000393594 (DNM1-002) 128203417-128255239 protein_coding
ENST00000441149 (DNM1-004) 128218269-128251244 retained_intron
ENST00000463998 (DNM1-011) 128233564-128239783 retained_intron
ENST00000475805 (DNM1-007) 128203379-128254162 protein_coding
ENST00000482638 (DNM1-012) 128222529-128242267 nonsense_mediated_decay
ENST00000486160 (DNM1-010) 128203446-128255237 protein_coding
ENST00000493925 (DNM1-006) 128240752-128247387 processed_transcript
ENSG00000167110 (GOLGA2)
golgin A2 		ENST00000421699 (GOLGA2-004) 128255829-128275989 protein_coding
ENST00000450617 (GOLGA2-006) 128261172-128275995 protein_coding
ENST00000458730 (GOLGA2-009) 128263034-128272865 protein_coding
ENST00000461031 (GOLGA2-012) 128260666-128261223 retained_intron
ENST00000462089 (GOLGA2-002) 128258545-128260514 retained_intron
ENST00000468488 (GOLGA2-010) 128261685-128265937 retained_intron
ENST00000470630 (GOLGA2-011) 128261121-128261970 retained_intron
ENST00000486411 (GOLGA2-001) 128260126-128260991 retained_intron
ENST00000490257 (GOLGA2-013) 128261192-128267202 retained_intron
ENST00000490628 (GOLGA2-008) 128273640-128275987 protein_coding
ENST00000496221 (GOLGA2-003) 128258713-128259246 retained_intron
ENST00000609374 (GOLGA2-014) 128257067-128275940 protein_coding
ENST00000610329 (GOLGA2-201) 128255832-128275938 protein_coding
ENST00000611957 (GOLGA2-202) 128255830-128275989 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LS_0001ENSDARG00000010042ENSDART00000026535ENSDART00000147972ENSDARG00000063197ENSDART00000092087ENSDART00000128274ENSDART00000144156ENSDART00000148411ENSDART00000148464ENSDART00000149599ENSDART00000150027CIL_0002LS_0002ENSG00000106976ENST00000341179ENST00000372923ENST00000393594ENST00000441149ENST00000463998ENST00000475805ENST00000482638ENST00000486160ENST00000493925ENSG00000167110ENST00000421699ENST00000450617ENST00000458730ENST00000461031ENST00000462089ENST00000468488ENST00000470630ENST00000486411ENST00000490257ENST00000490628ENST00000496221ENST00000609374ENST00000610329ENST00000611957
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LS_0001ENSDARG00000010042ENSDART00000026535ENSDART00000147972ENSDARG00000063197ENSDART00000092087ENSDART00000128274CIL_0002LS_0002ENSG00000106976ENST00000341179ENST00000372923ENST00000393594ENST00000463998ENST00000475805ENST00000482638ENST00000486160ENSG00000167110ENST00000421699ENST00000450617ENST00000458730ENST00000468488ENST00000609374ENST00000610329ENST00000611957
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010042 ENSDART00000026535 N/A N/A N/A 31.911±0.00 N/A N/A N/A N/A 0.012±0.00 N/A 1.460±0.00 N/A N/A N/A
ENSDART00000147972 N/A N/A N/A N/A N/A N/A 0.030±0.02 0.030±0.00 0.026±0.00 N/A 0.408±0.00 N/A N/A N/A
ENSDARG00000063197 ENSDART00000092087 N/A N/A N/A 3.459±0.00 N/A N/A N/A N/A 1.116±0.00 N/A 2.157±0.00 N/A N/A N/A
ENSDART00000128274 N/A N/A N/A N/A N/A N/A N/A N/A 0.748±0.00 N/A N/A N/A N/A N/A
ENSDART00000144156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106976 ENST00000341179 N/A N/A N/A 68.551±0.00 N/A N/A 0.542±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000372923 6.213±0.00 1.425±0.00 0.252±0.00 N/A 1.704±0.00 1.188±0.00 0.696±0.00 3.094±0.00 0.346±0.12 0.965±0.00 N/A 2.091±0.50 1.076±0.60 1.082±0.65
ENST00000393594 N/A N/A N/A 12.373±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463998 N/A N/A N/A N/A N/A N/A N/A N/A 3.225±0.00 N/A N/A N/A N/A N/A
ENST00000475805 N/A N/A N/A N/A 0.377±0.00 1.806±0.00 N/A 0.081±0.00 N/A N/A N/A 0.256±0.00 N/A N/A
ENST00000482638 N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A
ENST00000486160 N/A N/A N/A 180.174±0.00 N/A N/A N/A N/A N/A 0.322±0.00 0.608±0.00 N/A N/A N/A
ENST00000493925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167110 ENST00000421699 N/A N/A N/A N/A 0.671±0.00 0.802±0.00 N/A N/A 0.872±0.00 N/A 0.318±0.00 N/A 3.922±0.00 4.104±0.00
ENST00000450617 N/A N/A 1.311±0.00 2.771±0.00 N/A 2.287±0.00 2.771±1.18 2.659±0.00 4.641±0.00 2.668±0.00 2.379±0.00 N/A N/A N/A
ENST00000458730 N/A N/A N/A N/A 6.665±0.00 3.888±0.00 N/A 3.718±0.00 N/A 3.857±0.00 3.645±0.00 N/A N/A N/A
ENST00000461031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.805±0.00 N/A N/A
ENST00000470630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609374 4.551±0.00 4.726±0.00 1.616±0.00 2.001±1.38 3.362±2.43 3.446±0.00 0.903±0.00 1.202±0.00 2.352±0.00 N/A N/A 8.432±5.39 12.791±0.00 5.165±0.00
ENST00000610329 N/A 8.289±0.00 N/A N/A 7.182±0.00 3.860±0.00 N/A 1.175±0.00 3.255±0.00 4.153±0.00 N/A 10.739±0.00 8.493±1.62 5.686±0.00
ENST00000611957 N/A 4.765±0.00 N/A N/A 3.369±2.69 0.894±0.00 2.802±0.00 4.806±0.00 0.950±0.00 2.795±0.00 0.319±0.00 N/A 5.278±1.38 10.360±0.00

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