C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109610-ENSG00000181982 CGP 9606 4:24789912-24980204
GeneTranscriptPositionBiotype
ENSG00000109610 (SOD3)
superoxide dismutase 3, extracellular 		ENST00000382120 (SOD3-001) 24795463-24800842 protein_coding
ENST00000593742 (SOD3-003) 24789947-24790606 retained_intron
ENST00000598411 (SOD3-002) 24789912-24799683 protein_coding
ENSG00000181982 (CCDC149)
coiled-coil domain containing 149 		ENST00000324309 (CCDC149-003) 24826940-24980204 retained_intron
ENST00000389609 (CCDC149-002) 24807996-24980148 protein_coding
ENST00000502801 (CCDC149-005) 24808188-24912954 protein_coding
ENST00000504487 (CCDC149-001) 24806117-24912886 protein_coding
ENST00000507096 (CCDC149-006) 24808672-24820197 processed_transcript
ENST00000508236 (CCDC149-007) 24821057-24823045 processed_transcript
ENST00000512432 (CCDC149-008) 24836436-24853268 processed_transcript
CIL_0002OS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000072941-ENSMUSG00000045790 CGP 10090 5:52363946-52471543
GeneTranscriptPositionBiotype
ENSMUSG00000045790 (Ccdc149)
coiled-coil domain containing 149 		ENSMUST00000059428 (Ccdc149-201) 52374651-52471543 protein_coding
ENSMUSG00000072941 (Sod3)
superoxide dismutase 3, extracellular 		ENSMUST00000101208 (Sod3-201) 52363946-52371405 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OS_0001ENSG00000109610ENST00000382120ENST00000593742ENST00000598411ENSG00000181982ENST00000324309ENST00000389609ENST00000502801ENST00000504487ENST00000507096ENST00000508236ENST00000512432CIL_0002OS_0002ENSMUSG00000045790ENSMUST00000059428ENSMUSG00000072941ENSMUST00000101208
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OS_0001ENSG00000109610ENST00000382120ENST00000598411ENSG00000181982ENST00000324309ENST00000389609ENST00000502801ENST00000504487ENST00000507096ENST00000512432CIL_0002OS_0002ENSMUSG00000045790ENSMUST00000059428ENSMUSG00000072941ENSMUST00000101208
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109610 ENST00000382120 262.817±0.00 15.427±0.00 8.143±0.00 11.111±9.06 5.241±0.00 20.337±16.52 18.837±17.66 27.963±27.88 6.264±0.55 24.465±20.66 10.507±8.61 26.194±20.18 136.622±46.64 91.597±61.73
ENST00000593742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598411 N/A N/A N/A N/A 3.368±0.00 N/A N/A N/A N/A 3.194±0.00 N/A 29.440±0.00 145.972±0.00 32.763±0.00
ENSG00000181982 ENST00000324309 N/A N/A 0.334±0.00 N/A N/A N/A 0.092±0.00 N/A 0.331±0.00 N/A 0.153±0.00 N/A N/A N/A
ENST00000389609 2.224±0.00 N/A N/A N/A N/A N/A 1.075±0.00 N/A 1.079±0.28 1.412±0.00 1.074±0.00 0.814±0.25 1.039±0.07 N/A
ENST00000502801 N/A N/A N/A N/A N/A N/A N/A 0.757±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504487 5.003±0.00 4.449±0.00 0.244±0.00 4.008±2.51 2.788±0.00 4.096±2.95 0.769±0.55 1.960±1.23 1.623±0.31 1.729±0.76 1.289±0.00 2.592±1.34 3.920±1.62 3.872±2.09
ENST00000507096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.507±0.00 15.807±0.00 N/A
ENST00000508236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512432 N/A N/A 3.429±0.00 N/A N/A N/A N/A N/A N/A N/A 2.354±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045790 ENSMUST00000059428 0.923±0.31 0.726±0.12 1.562±0.24 10.263±12.18 0.528±0.33 1.724±0.48 1.180±0.38 0.729±0.13 0.364±0.21 1.257±0.21 0.260±0.07 2.210±0.90 0.288±0.12 0.288±0.02
ENSMUSG00000072941 ENSMUST00000101208 73.688±45.51 322.983±6.37 11.686±0.03 0.501±0.23 71.904±24.66 25.703±2.03 12.569±3.94 160.681±16.55 12.547±9.23 166.490±19.82 1.473±0.30 44.905±17.71 6.298±4.81 8.039±2.86

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