C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002S3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061062-ENSDARG00000054583 CGP 7955 9:42532802-42580755
GeneTranscriptPositionBiotype
ENSDARG00000054583 (mfsd6b)
major facilitator superfamily domain containing 6b 		ENSDART00000004544 (mfsd6b-201) 42555875-42578667 protein_coding
ENSDART00000076815 (mfsd6b-202) 42555875-42580752 protein_coding
ENSDART00000135821 (mfsd6b-001) 42555874-42580755 protein_coding
ENSDARG00000061062 (tmem194b)
transmembrane protein 194B 		ENSDART00000100265 (tmem194b-201) 42533133-42554690 protein_coding
ENSDART00000132501 (tmem194b-002) 42532802-42543451 protein_coding
ENSDART00000137187 (tmem194b-001) 42547666-42554693 protein_coding
ENSDART00000138722 (tmem194b-003) 42547985-42552429 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0002S3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043015-ENSMUSG00000041439 CGP 10090 1:52630703-52727462
GeneTranscriptPositionBiotype
ENSMUSG00000043015 (Tmem194b)
transmembrane protein 194B 		ENSMUST00000165859 (Tmem194b-005) 52630703-52651919 protein_coding
ENSMUST00000185483 (Tmem194b-001) 52630747-52650636 nonsense_mediated_decay
ENSMUST00000185790 (Tmem194b-004) 52630797-52650702 nonsense_mediated_decay
ENSMUST00000186903 (Tmem194b-006) 52641516-52651919 retained_intron
ENSMUST00000188507 (Tmem194b-002) 52630737-52651919 nonsense_mediated_decay
ENSMUST00000190108 (Tmem194b-003) 52630752-52650729 retained_intron
ENSMUST00000190452 (Tmem194b-007) 52641984-52650656 processed_transcript
ENSMUST00000191076 (Tmem194b-008) 52645181-52650027 retained_intron
ENSMUSG00000100302 (RP23-335D20.1)
predicted gene 29670 		ENSMUST00000190228 (RP23-335D20.1-001) 52702272-52704762 sense_intronic

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S3_0001ENSDARG00000054583ENSDART00000004544ENSDART00000076815ENSDART00000135821ENSDARG00000061062ENSDART00000100265ENSDART00000132501ENSDART00000137187ENSDART00000138722CIL_0002S3_0002ENSMUSG00000043015ENSMUST00000165859ENSMUST00000185483ENSMUST00000185790ENSMUST00000186903ENSMUST00000188507ENSMUST00000190108ENSMUST00000190452ENSMUST00000191076ENSMUSG00000100302ENSMUST00000190228
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S3_0001ENSDARG00000054583ENSDART00000004544ENSDART00000076815ENSDART00000135821ENSDARG00000061062ENSDART00000100265ENSDART00000132501ENSDART00000137187CIL_0002S3_0002ENSMUSG00000043015ENSMUST00000165859ENSMUST00000185483ENSMUST00000185790ENSMUST00000186903ENSMUST00000188507ENSMUST00000190108ENSMUST00000190452ENSMUST00000191076ENSMUSG00000100302ENSMUST00000190228
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054583 ENSDART00000004544 N/A N/A N/A 0.672±0.00 N/A N/A 1.138±0.06 0.355±0.00 0.068±0.00 N/A 0.353±0.00 N/A N/A N/A
ENSDART00000076815 N/A N/A N/A 0.709±0.23 N/A N/A 0.097±0.00 N/A N/A N/A 0.106±0.00 N/A N/A N/A
ENSDART00000135821 N/A N/A N/A 2.208±0.12 N/A N/A N/A 3.219±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000061062 ENSDART00000100265 N/A N/A N/A 4.750±0.42 N/A N/A 2.944±0.12 3.241±0.00 0.409±0.00 N/A 0.941±0.00 N/A N/A N/A
ENSDART00000132501 N/A N/A N/A 3.269±0.00 N/A N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A
ENSDART00000137187 N/A N/A N/A 5.563±3.29 N/A N/A 3.955±1.75 2.218±0.11 N/A N/A 0.146±0.00 N/A N/A N/A
ENSDART00000138722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043015 ENSMUST00000165859 0.293±0.00 0.710±0.00 1.131±0.27 N/A 1.987±0.49 1.177±0.30 0.423±0.20 0.535±0.18 0.605±0.38 2.213±1.07 0.121±0.04 1.908±1.09 1.614±0.78 N/A
ENSMUST00000185483 0.745±0.09 N/A 1.051±0.00 N/A 1.612±0.00 N/A N/A 0.658±0.08 0.542±0.22 N/A 0.130±0.06 1.120±0.27 0.652±0.22 3.401±0.00
ENSMUST00000185790 N/A N/A N/A 0.624±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.475±1.94
ENSMUST00000186903 0.472±0.12 0.351±0.00 0.691±0.08 1.777±1.22 0.958±0.18 0.358±0.06 0.247±0.05 0.350±0.00 0.380±0.15 1.441±0.12 0.085±0.02 0.823±0.41 0.304±0.22 N/A
ENSMUST00000188507 1.931±0.18 0.335±0.00 1.407±0.02 2.641±0.71 1.331±0.21 N/A N/A 0.484±0.23 0.361±0.16 1.776±0.75 0.165±0.05 1.174±0.43 0.628±0.00 1.348±0.78
ENSMUST00000190108 N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 1.379±0.00 N/A 3.808±0.00
ENSMUST00000191076 N/A 0.641±0.00 N/A N/A N/A 1.440±0.00 N/A N/A 0.074±0.00 N/A N/A 3.518±0.00 N/A 7.263±0.00
ENSMUSG00000100302 ENSMUST00000190228 0.039±0.02 0.057±0.00 0.013±0.00 0.066±0.04 0.080±0.02 0.118±0.04 0.031±0.02 0.018±0.00 0.003±0.00 0.066±0.03 N/A 0.118±0.04 0.013±0.00 0.018±0.00

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