C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 194B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043015 Tmem194b 10090 + 1:52630703-52651919 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000165859 Tmem194b-005 52630703-52651919 protein_coding
  ENSMUST00000185483 Tmem194b-001 52630747-52650636 nonsense_mediated_decay
  ENSMUST00000185790 Tmem194b-004 52630797-52650702 nonsense_mediated_decay
  ENSMUST00000186903 Tmem194b-006 52641516-52651919 retained_intron
  ENSMUST00000188507 Tmem194b-002 52630737-52651919 nonsense_mediated_decay
  ENSMUST00000190108 Tmem194b-003 52630752-52650729 retained_intron
  ENSMUST00000190452 Tmem194b-007 52641984-52650656 processed_transcript
  ENSMUST00000191076 Tmem194b-008 52645181-52650027 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165859ENSMUST00000185483ENSMUST00000185790ENSMUST00000186903ENSMUST00000188507ENSMUST00000190108ENSMUST00000190452ENSMUST00000191076
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165859 0.293±0.00 0.710±0.00 1.131±0.27 N/A 1.987±0.49 1.177±0.30 0.423±0.20 0.535±0.18 0.605±0.38 2.213±1.07 0.121±0.04 1.908±1.09 1.614±0.78 N/A
ENSMUST00000185483 0.745±0.09 N/A 1.051±0.00 N/A 1.612±0.00 N/A N/A 0.658±0.08 0.542±0.22 N/A 0.130±0.06 1.120±0.27 0.652±0.22 3.401±0.00
ENSMUST00000185790 N/A N/A N/A 0.624±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.475±1.94
ENSMUST00000186903 0.472±0.12 0.351±0.00 0.691±0.08 1.777±1.22 0.958±0.18 0.358±0.06 0.247±0.05 0.350±0.00 0.380±0.15 1.441±0.12 0.085±0.02 0.823±0.41 0.304±0.22 N/A
ENSMUST00000188507 1.931±0.18 0.335±0.00 1.407±0.02 2.641±0.71 1.331±0.21 N/A N/A 0.484±0.23 0.361±0.16 1.776±0.75 0.165±0.05 1.174±0.43 0.628±0.00 1.348±0.78
ENSMUST00000190108 N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 1.379±0.00 N/A 3.808±0.00
ENSMUST00000191076 N/A 0.641±0.00 N/A N/A N/A 1.440±0.00 N/A N/A 0.074±0.00 N/A N/A 3.518±0.00 N/A 7.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RZ CIL_0002RZ_0002 CGP 1:52457294-52651919
CIL_0002S3 CIL_0002S3_0002 CGP 1:52630703-52727462

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061062 tmem194b transmembrane protein 194B protein_coding Danio_rerio
ENSG00000189362 TMEM194B transmembrane protein 194B protein_coding Homo_sapiens

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