C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 194B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165859 Tmem194b-005 ENSMUSG00000043015 10090 + 1:52630703-52651919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000165859
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000165859 0.293±0.00 0.710±0.00 1.131±0.27 1.987±0.49 1.177±0.30 0.423±0.20 0.535±0.18 0.605±0.38 2.213±1.07 0.121±0.04 1.908±1.09 1.614±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RZ CIL_0002RZ_0002 CGP 1:52457294-52651919
CIL_0002S3 CIL_0002S3_0002 CGP 1:52630703-52727462

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343105 TMEM194B-002 nonsense_mediated_decay Homo_sapiens 2.8026e-45 185
ENST00000409150 TMEM194B-001 protein_coding Homo_sapiens 0 979
ENST00000414176 TMEM194B-004 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000444545 TMEM194B-003 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000492292 TMEM194B-006 processed_transcript Homo_sapiens 0 228

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