C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002SK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128268-ENSG00000100335 CGP 9606 22:39457344-39518132
GeneTranscriptPositionBiotype
ENSG00000100335 (MIEF1)
mitochondrial elongation factor 1 		ENST00000325301 (MIEF1-001) 39502353-39518132 protein_coding
ENST00000402881 (MIEF1-005) 39500100-39515708 protein_coding
ENST00000404569 (MIEF1-003) 39502377-39516178 protein_coding
ENST00000428069 (MIEF1-004) 39502397-39513866 nonsense_mediated_decay
ENST00000433117 (MIEF1-002) 39502302-39516380 nonsense_mediated_decay
ENST00000434364 (MIEF1-015) 39502395-39511422 protein_coding
ENST00000464629 (MIEF1-007) 39499432-39504302 processed_transcript
ENST00000465564 (MIEF1-009) 39501731-39502385 processed_transcript
ENST00000467866 (MIEF1-008) 39500347-39504454 processed_transcript
ENST00000478342 (MIEF1-011) 39502252-39504534 processed_transcript
ENST00000479514 (MIEF1-013) 39503457-39504510 processed_transcript
ENST00000481746 (MIEF1-012) 39502256-39504485 processed_transcript
ENST00000489792 (MIEF1-010) 39502211-39503862 processed_transcript
ENST00000494219 (MIEF1-014) 39502355-39504711 retained_intron
ENSG00000128268 (MGAT3)
mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase 		ENST00000341184 (MGAT3-001) 39457344-39492194 protein_coding
ENST00000418314 (MGAT3-003) 39477513-39487588 protein_coding
ENST00000429402 (MGAT3-002) 39472788-39487830 protein_coding
ENSG00000227188 (RP5-1104E15.6)
 ENST00000432239 (RP5-1104E15.6-001) 39475807-39476822 antisense
CIL_0002SK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042428-ENSMUSG00000022412 CGP 10090 15:80173721-80253366
GeneTranscriptPositionBiotype
ENSMUSG00000022412 (Mief1)
mitochondrial elongation factor 1 		ENSMUST00000023048 (Mief1-201) 80234080-80253366 protein_coding
ENSMUST00000166030 (Mief1-202) 80234108-80250565 protein_coding
ENSMUSG00000042428 (Mgat3)
mannoside acetylglucosaminyltransferase 3 		ENSMUST00000044970 (Mgat3-201) 80173721-80215519 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SK_0001ENSG00000100335ENST00000325301ENST00000402881ENST00000404569ENST00000428069ENST00000433117ENST00000434364ENST00000464629ENST00000465564ENST00000467866ENST00000478342ENST00000479514ENST00000481746ENST00000489792ENST00000494219ENSG00000128268ENST00000341184ENST00000418314ENST00000429402ENSG00000227188ENST00000432239CIL_0002SK_0002ENSMUSG00000022412ENSMUST00000023048ENSMUST00000166030ENSMUSG00000042428ENSMUST00000044970
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SK_0001ENSG00000100335ENST00000325301ENST00000404569ENST00000433117ENSG00000128268ENST00000341184ENST00000418314ENSG00000227188ENST00000432239CIL_0002SK_0002ENSMUSG00000022412ENSMUST00000023048ENSMUST00000166030ENSMUSG00000042428ENSMUST00000044970
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100335 ENST00000325301 5.755±0.00 9.053±0.00 N/A 4.103±2.50 6.366±0.00 4.311±0.00 1.875±1.27 6.682±0.00 3.777±3.21 2.516±0.00 1.735±0.58 7.416±2.55 7.546±2.80 5.374±1.07
ENST00000402881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404569 N/A N/A N/A N/A 1.890±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433117 1.723±0.00 N/A 1.254±0.00 2.325±0.65 1.470±0.00 3.793±0.00 0.861±0.44 N/A 2.331±0.00 0.842±0.21 2.105±0.00 2.482±0.70 1.650±0.43 8.611±3.81
ENST00000434364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128268 ENST00000341184 3.765±0.00 3.328±0.00 N/A 11.062±9.05 5.431±0.00 1.781±0.00 2.171±0.00 2.284±0.00 0.142±0.09 2.909±0.00 0.160±0.00 3.274±1.27 8.519±6.46 2.262±0.00
ENST00000418314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.445±0.00
ENST00000429402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227188 ENST00000432239 0.037±0.00 0.041±0.00 N/A 0.647±0.33 0.111±0.00 1.162±0.00 0.074±0.00 N/A N/A 0.432±0.00 N/A 0.202±0.05 0.109±0.03 0.956±0.81
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022412 ENSMUST00000023048 7.702±1.17 6.558±1.43 5.041±0.27 3.653±2.01 5.332±1.87 6.942±0.64 4.876±0.31 6.102±0.58 4.353±1.27 6.230±1.04 2.413±0.73 7.387±3.27 5.097±1.45 10.792±4.47
ENSMUST00000166030 1.286±0.00 3.723±1.57 N/A N/A 2.291±0.18 2.419±0.63 N/A N/A N/A N/A N/A 2.787±0.56 N/A 7.907±0.78
ENSMUSG00000042428 ENSMUST00000044970 3.162±2.54 4.748±1.17 30.854±4.98 18.729±1.32 2.424±0.84 16.189±10.77 2.100±0.34 7.747±0.44 0.406±0.39 11.924±2.07 0.376±0.10 9.716±3.14 1.589±0.97 0.122±0.00

Loading