C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial elongation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023048 Mief1-201 ENSMUSG00000022412 10090 + 15:80234080-80253366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023048
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023048 7.702±1.17 6.558±1.43 5.041±0.27 3.653±2.01 5.332±1.87 6.942±0.64 4.876±0.31 6.102±0.58 4.353±1.27 6.230±1.04 2.413±0.73 7.387±3.27 5.097±1.45 10.792±4.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SK CIL_0002SK_0002 CGP 15:80173721-80253366
CIL_0003MS CIL_0003MS_0002 CGP 15:80234080-80257540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000266 ISS mitochondrial fission
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005741 ISS mitochondrial outer membrane
GO:0016021 IEA integral component of membrane
GO:0019003 IEA GDP binding
GO:0042802 IEA identical protein binding
GO:0043531 IEA ADP binding
GO:0090141 ISS positive regulation of mitochondrial fission
GO:0090314 ISS positive regulation of protein targeting to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325301 MIEF1-001 protein_coding Homo_sapiens 0 2170
ENST00000402881 MIEF1-005 protein_coding Homo_sapiens 0 1977
ENST00000404569 MIEF1-003 protein_coding Homo_sapiens 0 1897
ENST00000428069 MIEF1-004 nonsense_mediated_decay Homo_sapiens 0 730
ENST00000433117 MIEF1-002 nonsense_mediated_decay Homo_sapiens 0 1339
ENST00000434364 MIEF1-015 protein_coding Homo_sapiens 0 248
ENST00000467866 MIEF1-008 processed_transcript Homo_sapiens 0 322
ENST00000478342 MIEF1-011 processed_transcript Homo_sapiens 0 248
ENST00000479514 MIEF1-013 processed_transcript Homo_sapiens 0 248
ENST00000481746 MIEF1-012 processed_transcript Homo_sapiens 0 248
ENST00000494219 MIEF1-014 retained_intron Homo_sapiens 0 302

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