C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial elongation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166030 Mief1-202 ENSMUSG00000022412 10090 + 15:80234108-80250565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonOvaryTestisENSMUST00000166030
Transcript ID Adipose Adrenal Breast Colon Ovary Testis
ENSMUST00000166030 1.286±0.00 3.723±1.57 2.291±0.18 2.419±0.63 2.787±0.56 7.907±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SK CIL_0002SK_0002 CGP 15:80173721-80253366
CIL_0003MS CIL_0003MS_0002 CGP 15:80234080-80257540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000266 ISS mitochondrial fission
GO:0005739 IDA mitochondrion
GO:0005741 ISS mitochondrial outer membrane
GO:0016021 IEA integral component of membrane
GO:0090141 ISS positive regulation of mitochondrial fission
GO:0090314 ISS positive regulation of protein targeting to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325301 MIEF1-001 protein_coding Homo_sapiens 0 1893
ENST00000402881 MIEF1-005 protein_coding Homo_sapiens 0 1753
ENST00000404569 MIEF1-003 protein_coding Homo_sapiens 0 1893
ENST00000428069 MIEF1-004 nonsense_mediated_decay Homo_sapiens 0 730
ENST00000433117 MIEF1-002 nonsense_mediated_decay Homo_sapiens 0 1339
ENST00000434364 MIEF1-015 protein_coding Homo_sapiens 0 248
ENST00000467866 MIEF1-008 processed_transcript Homo_sapiens 0 248
ENST00000478342 MIEF1-011 processed_transcript Homo_sapiens 0 248
ENST00000479514 MIEF1-013 processed_transcript Homo_sapiens 0 248
ENST00000481746 MIEF1-012 processed_transcript Homo_sapiens 0 248
ENST00000494219 MIEF1-014 retained_intron Homo_sapiens 0 248

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