C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002SR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004151-ENSDARG00000035005 CGP 7955 13:1254310-1281132
GeneTranscriptPositionBiotype
ENSDARG00000004151 (rab23)
RAB23, member RAS oncogene family
ENSDART00000019983 (rab23-001) 1254310-1267359 protein_coding
ENSDARG00000035005 (bag2)
BCL2-associated athanogene 2
ENSDART00000049684 (bag2-001) 1277281-1281132 protein_coding
CIL_0002SR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004768-ENSMUSG00000042215 CGP 10090 1:33719887-33757795
GeneTranscriptPositionBiotype
ENSMUSG00000004768 (Rab23)
RAB23, member RAS oncogene family
ENSMUST00000088287 (Rab23-001) 33719887-33742564 protein_coding
ENSMUST00000115174 (Rab23-003) 33720407-33742557 protein_coding
ENSMUST00000122822 (Rab23-008) 33736657-33739370 retained_intron
ENSMUST00000132066 (Rab23-009) 33738137-33742557 retained_intron
ENSMUST00000135330 (Rab23-005) 33719910-33725476 retained_intron
ENSMUST00000138024 (Rab23-002) 33719909-33742557 nonsense_mediated_decay
ENSMUST00000140354 (Rab23-004) 33719887-33726891 retained_intron
ENSMUST00000150593 (Rab23-007) 33734528-33739458 retained_intron
ENSMUST00000151482 (Rab23-006) 33720138-33735354 retained_intron
ENSMUSG00000042215 (Bag2)
BCL2-associated athanogene 2
ENSMUST00000044691 (Bag2-001) 33745484-33757795 protein_coding
ENSMUST00000155484 (Bag2-002) 33746739-33748719 retained_intron
ENSMUST00000187602 (Bag2-004) 33746802-33757741 protein_coding
ENSMUST00000189741 (Bag2-003) 33756773-33757727 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SR_0001ENSDARG00000004151ENSDART00000019983ENSDARG00000035005ENSDART00000049684CIL_0002SR_0002ENSMUSG00000004768ENSMUST00000088287ENSMUST00000115174ENSMUST00000122822ENSMUST00000132066ENSMUST00000135330ENSMUST00000138024ENSMUST00000140354ENSMUST00000150593ENSMUST00000151482ENSMUSG00000042215ENSMUST00000044691ENSMUST00000155484ENSMUST00000187602ENSMUST00000189741
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SR_0001ENSDARG00000004151ENSDART00000019983ENSDARG00000035005ENSDART00000049684CIL_0002SR_0002ENSMUSG00000004768ENSMUST00000088287ENSMUST00000115174ENSMUST00000132066ENSMUST00000138024ENSMUST00000150593ENSMUST00000151482ENSMUSG00000042215ENSMUST00000044691
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004151 ENSDART00000019983 N/A N/A N/A 2.755±0.71 N/A N/A 2.920±0.74 1.320±0.00 1.460±0.00 N/A 1.183±0.00 N/A N/A N/A
ENSDARG00000035005 ENSDART00000049684 N/A N/A N/A 1.703±0.33 N/A N/A 11.330±2.70 2.794±0.00 1.516±0.00 N/A 3.654±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004768 ENSMUST00000088287 3.914±2.39 1.849±0.92 4.510±0.01 4.399±1.35 1.337±0.92 4.690±0.60 1.743±0.24 1.898±0.58 1.037±0.56 4.184±0.63 0.913±0.16 2.480±1.22 3.454±0.94 2.178±0.22
ENSMUST00000115174 N/A N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A N/A 0.260±0.00 3.409±0.09 N/A N/A
ENSMUST00000122822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132066 1.539±0.23 2.196±0.72 N/A 1.346±0.00 1.561±0.34 1.441±0.18 N/A 0.839±0.36 0.793±0.42 1.805±0.00 0.275±0.08 2.910±1.46 N/A 2.860±0.27
ENSMUST00000135330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138024 N/A N/A N/A N/A 0.505±0.00 N/A N/A 0.337±0.00 N/A N/A 0.241±0.00 N/A N/A N/A
ENSMUST00000140354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150593 N/A N/A N/A 8.717±0.00 N/A N/A N/A N/A N/A N/A N/A 8.407±0.00 8.532±0.00 N/A
ENSMUST00000151482 N/A N/A N/A 4.275±0.00 N/A N/A N/A N/A N/A N/A N/A 4.254±0.00 3.462±0.12 2.596±0.00
ENSMUSG00000042215 ENSMUST00000044691 9.000±6.38 12.089±0.89 36.410±3.82 3.794±2.15 6.592±1.81 14.040±2.05 17.942±4.02 8.055±1.20 11.564±10.46 6.130±0.70 7.401±0.82 13.644±4.65 21.394±11.78 3.332±1.33
ENSMUST00000155484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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