C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002TC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054342-ENSDARG00000076371 CGP 7955 11:45272485-45290065
GeneTranscriptPositionBiotype
ENSDARG00000054342 (CABZ01080074.1)
Claudin 		ENSDART00000076524 (CABZ01080074.1-201) 45272485-45273117 protein_coding
ENSDARG00000076371 (SHROOM2 (1 of 2))
shroom family member 2 		ENSDART00000111271 (SHROOM2 (1 of 2)-201) 45276968-45290065 protein_coding
CIL_0002TC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000091863-ENSMUSG00000045180 CGP 10090 X:152563334-152769465
GeneTranscriptPositionBiotype
ENSMUSG00000045180 (Shroom2)
shroom family member 2 		ENSMUST00000062317 (Shroom2-001) 152609992-152769465 protein_coding
ENSMUST00000101141 (Shroom2-201) 152609509-152769461 protein_coding
ENSMUST00000124141 (Shroom2-005) 152618914-152643924 processed_transcript
ENSMUST00000137217 (Shroom2-002) 152609992-152644543 processed_transcript
ENSMUST00000141677 (Shroom2-004) 152619123-152644110 processed_transcript
ENSMUST00000152746 (Shroom2-003) 152612528-152673240 processed_transcript
ENSMUSG00000081993 (Gm8475)
predicted gene 8475 		ENSMUST00000118211 (Gm8475-001) 152565212-152565737 processed_pseudogene
ENSMUSG00000091863 (Gm7157)
predicted gene 7157 		ENSMUST00000164764 (Gm7157-201) 152563334-152563969 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TC_0001ENSDARG00000054342ENSDART00000076524ENSDARG00000076371ENSDART00000111271CIL_0002TC_0002ENSMUSG00000045180ENSMUST00000062317ENSMUST00000101141ENSMUST00000124141ENSMUST00000137217ENSMUST00000141677ENSMUST00000152746ENSMUSG00000081993ENSMUST00000118211ENSMUSG00000091863ENSMUST00000164764
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TC_0001ENSDARG00000054342ENSDART00000076524ENSDARG00000076371ENSDART00000111271CIL_0002TC_0002ENSMUSG00000045180ENSMUST00000062317ENSMUST00000101141ENSMUST00000124141ENSMUST00000137217ENSMUST00000152746ENSMUSG00000081993ENSMUST00000118211ENSMUSG00000091863ENSMUST00000164764
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054342 ENSDART00000076524 N/A N/A N/A 0.144±0.01 N/A N/A N/A 0.648±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000076371 ENSDART00000111271 N/A N/A N/A 0.314±0.12 N/A N/A 0.983±0.14 0.673±0.00 0.035±0.00 N/A 0.054±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045180 ENSMUST00000062317 0.677±0.60 0.426±0.15 0.291±0.05 0.763±0.00 0.432±0.23 0.880±0.07 0.261±0.06 1.072±0.21 0.717±0.56 1.045±0.26 0.082±0.01 1.980±0.86 1.934±0.94 0.248±0.04
ENSMUST00000101141 0.537±0.29 0.889±0.33 0.336±0.03 N/A 0.203±0.05 1.012±0.35 0.368±0.05 1.524±0.36 0.652±0.53 1.187±0.70 0.141±0.00 1.680±0.91 0.939±0.59 0.170±0.00
ENSMUST00000124141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.748±0.00 N/A N/A
ENSMUST00000137217 N/A N/A N/A 3.287±1.29 N/A 2.364±0.00 N/A N/A N/A N/A 0.097±0.01 0.854±0.00 N/A 0.198±0.00
ENSMUST00000141677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152746 N/A 0.335±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00
ENSMUSG00000081993 ENSMUST00000118211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.485±0.31
ENSMUSG00000091863 ENSMUST00000164764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 3.790±2.29

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