C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002U1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075012-ENSDARG00000067596 CGP 7955 9:56926542-56987274
GeneTranscriptPositionBiotype
ENSDARG00000067596 (fancb)
Fanconi anemia, complementation group B
ENSDART00000097318 (fancb-201) 56962648-56987274 protein_coding
CIL_0002U1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101958-ENSG00000181544 CGP 9606 X:14529298-14873069
GeneTranscriptPositionBiotype
ENSG00000101958 (GLRA2)
glycine receptor, alpha 2
ENST00000218075 (GLRA2-001) 14529528-14731812 protein_coding
ENST00000355020 (GLRA2-003) 14529772-14730570 protein_coding
ENST00000415367 (GLRA2-002) 14531146-14607247 protein_coding
ENST00000443437 (GLRA2-201) 14529298-14731809 protein_coding
ENSG00000181544 (FANCB)
Fanconi anemia, complementation group B
ENST00000324138 (FANCB-001) 14843407-14873069 protein_coding
ENST00000398334 (FANCB-201) 14843407-14873062 protein_coding
ENST00000452869 (FANCB-002) 14843693-14873052 protein_coding
ENST00000489126 (FANCB-003) 14865343-14869243 retained_intron
ENSG00000231066 (NPM1P9)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 9
ENST00000453156 (NPM1P9-001) 14834476-14835319 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U1_0001ENSDARG00000067596ENSDART00000097318CIL_0002U1_0002ENSG00000101958ENST00000218075ENST00000355020ENST00000415367ENST00000443437ENSG00000181544ENST00000324138ENST00000398334ENST00000452869ENST00000489126ENSG00000231066ENST00000453156
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U1_0001ENSDARG00000067596ENSDART00000097318CIL_0002U1_0002ENSG00000101958ENST00000218075ENST00000355020ENST00000415367ENST00000443437ENSG00000181544ENST00000324138ENST00000398334ENST00000452869ENST00000489126ENSG00000231066ENST00000453156
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000067596 ENSDART00000097318 N/A N/A N/A 0.232±0.12 N/A N/A 0.319±0.18 N/A 0.118±0.00 N/A 0.113±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101958 ENST00000218075 N/A N/A N/A 0.646±0.23 N/A 0.022±0.00 N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A
ENST00000355020 N/A N/A N/A 0.771±0.00 N/A 0.182±0.07 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A
ENST00000415367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.02 N/A
ENST00000443437 N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A 0.016±0.00 0.014±0.00 N/A 0.050±0.03 N/A N/A
ENSG00000181544 ENST00000324138 N/A N/A N/A 0.117±0.00 N/A N/A N/A 0.071±0.00 N/A 0.110±0.00 N/A N/A 0.028±0.00 N/A
ENST00000398334 N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A N/A 0.362±0.00 0.162±0.00 0.072±0.00
ENST00000452869 0.096±0.00 0.026±0.00 0.036±0.00 0.017±0.00 0.160±0.03 0.108±0.00 0.054±0.01 0.113±0.00 0.124±0.00 0.137±0.02 N/A 0.180±0.09 N/A 0.118±0.01
ENST00000489126 N/A 0.246±0.00 N/A N/A N/A N/A 0.065±0.00 N/A 0.342±0.00 0.113±0.00 N/A N/A N/A N/A
ENSG00000231066 ENST00000453156 0.013±0.00 0.054±0.00 N/A 0.048±0.00 0.331±0.00 0.024±0.00 0.012±0.00 0.026±0.00 0.063±0.00 0.132±0.12 0.024±0.00 0.078±0.05 0.090±0.05 0.102±0.09

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