C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002U6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017803-ENSDARG00000086215 CGP 7955 9:9799155-9926924
GeneTranscriptPositionBiotype
ENSDARG00000017803 (gsk3b)
glycogen synthase kinase 3 beta 		ENSDART00000018228 (gsk3b-001) 9799155-9892656 protein_coding
ENSDARG00000086215 (GPR156)
G protein-coupled receptor 156 		ENSDART00000128704 (GPR156-201) 9900910-9918351 protein_coding
ENSDART00000149021 (GPR156-001) 9897338-9926924 protein_coding
CIL_0002U6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000082701-ENSG00000175697 CGP 9606 3:119821323-120285094
GeneTranscriptPositionBiotype
ENSG00000082701 (GSK3B)
glycogen synthase kinase 3 beta 		ENST00000264235 (GSK3B-001) 119821323-120094417 protein_coding
ENST00000316626 (GSK3B-002) 119826686-120093666 protein_coding
ENST00000473886 (GSK3B-004) 119826701-119876508 processed_transcript
ENST00000474830 (GSK3B-003) 119826693-119843609 retained_intron
ENSG00000175697 (GPR156)
G protein-coupled receptor 156 		ENST00000315843 (GPR156-201) 120165481-120244295 protein_coding
ENST00000461057 (GPR156-001) 120166958-120244116 protein_coding
ENST00000464295 (GPR156-002) 120165481-120285094 protein_coding
ENST00000481907 (GPR156-003) 120242860-120285074 retained_intron
ENST00000495912 (GPR156-004) 120164645-120244120 nonsense_mediated_decay
ENSG00000239835 (RP11-767L7.1)
 ENST00000482027 (RP11-767L7.1-001) 120028740-120029868 processed_pseudogene
ENSG00000241546 (RP11-767L7.2)
 ENST00000491262 (RP11-767L7.2-001) 120041190-120041537 processed_pseudogene
ENSG00000242622 (RP11-18H7.1)
 ENST00000469070 (RP11-18H7.1-002) 120095270-120099186 lincRNA
ENST00000484076 (RP11-18H7.1-001) 120094895-120136783 lincRNA
ENST00000485898 (RP11-18H7.1-003) 120095630-120098787 lincRNA
ENSG00000244139 (RN7SL397P)
RNA, 7SL, cytoplasmic 397, pseudogene 		ENST00000487309 (RN7SL397P-201) 120121909-120122206 misc_RNA
ENSG00000244308 (RN7SL762P)
RNA, 7SL, cytoplasmic 762, pseudogene 		ENST00000469864 (RN7SL762P-201) 120110498-120110786 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U6_0001ENSDARG00000017803ENSDART00000018228ENSDARG00000086215ENSDART00000128704ENSDART00000149021CIL_0002U6_0002ENSG00000082701ENST00000264235ENST00000316626ENST00000473886ENST00000474830ENSG00000175697ENST00000315843ENST00000461057ENST00000464295ENST00000481907ENST00000495912ENSG00000239835ENST00000482027ENSG00000241546ENST00000491262ENSG00000242622ENST00000469070ENST00000484076ENST00000485898ENSG00000244139ENST00000487309ENSG00000244308ENST00000469864
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U6_0001ENSDARG00000017803ENSDART00000018228ENSDARG00000086215ENSDART00000128704ENSDART00000149021CIL_0002U6_0002ENSG00000082701ENST00000264235ENST00000316626ENST00000473886ENSG00000175697ENST00000315843ENST00000461057ENST00000464295ENST00000481907ENST00000495912ENSG00000239835ENST00000482027ENSG00000241546ENST00000491262ENSG00000242622ENST00000469070ENST00000484076ENST00000485898ENSG00000244139ENST00000487309ENSG00000244308ENST00000469864
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017803 ENSDART00000018228 N/A N/A N/A 20.739±7.77 N/A N/A 4.004±1.92 2.258±0.80 1.976±0.00 N/A 6.567±0.00 N/A N/A N/A
ENSDARG00000086215 ENSDART00000128704 N/A N/A N/A 0.463±0.00 N/A N/A 0.122±0.00 0.230±0.00 0.019±0.00 N/A 0.078±0.00 N/A N/A N/A
ENSDART00000149021 N/A N/A N/A 0.267±0.09 N/A N/A 0.482±0.23 0.227±0.04 N/A N/A 0.345±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000082701 ENST00000264235 6.787±0.00 3.767±0.00 2.229±0.00 9.058±1.71 4.789±1.53 3.502±0.64 3.586±2.76 3.392±0.00 2.275±1.04 4.021±1.13 5.050±0.00 3.482±0.84 4.002±0.09 4.235±1.28
ENST00000316626 4.897±0.00 N/A 3.309±0.00 13.161±0.00 8.528±0.00 3.743±1.29 6.603±0.00 3.600±0.00 3.771±0.30 9.549±1.89 4.184±0.00 6.389±3.02 3.723±0.24 11.014±0.45
ENST00000473886 N/A N/A 15.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175697 ENST00000315843 0.045±0.00 N/A N/A N/A N/A 0.022±0.01 0.003±0.00 0.043±0.00 0.181±0.00 0.036±0.01 N/A N/A N/A 1.364±0.72
ENST00000461057 N/A N/A 0.226±0.00 0.076±0.00 N/A N/A N/A 0.327±0.00 N/A N/A N/A 0.017±0.00 N/A N/A
ENST00000464295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 0.101±0.00 0.251±0.00
ENST00000481907 N/A 0.119±0.00 N/A N/A 0.191±0.00 0.101±0.00 N/A N/A 0.272±0.00 0.105±0.00 N/A 0.022±0.00 N/A 1.429±0.00
ENST00000495912 N/A N/A 0.060±0.00 N/A 0.064±0.00 N/A 0.015±0.00 N/A N/A 0.013±0.00 0.057±0.00 0.139±0.11 0.085±0.07 0.444±0.00
ENSG00000239835 ENST00000482027 0.023±0.00 0.045±0.00 N/A 0.070±0.00 0.011±0.00 N/A 0.011±0.00 0.367±0.28 N/A N/A N/A N/A N/A N/A
ENSG00000241546 ENST00000491262 N/A 0.253±0.00 N/A N/A 0.125±0.00 N/A N/A N/A N/A 2.344±0.00 N/A 1.710±0.00 N/A 0.065±0.03
ENSG00000242622 ENST00000469070 N/A 0.145±0.00 0.269±0.00 N/A 0.207±0.06 0.643±0.00 0.138±0.00 0.291±0.00 0.040±0.01 0.143±0.00 N/A 0.554±0.00 0.486±0.26 1.978±0.86
ENST00000484076 0.146±0.00 0.249±0.00 N/A N/A 0.060±0.00 0.018±0.00 0.026±0.00 N/A 0.054±0.00 N/A N/A N/A 0.102±0.06 1.495±0.93
ENST00000485898 0.423±0.00 0.372±0.00 N/A 0.649±0.02 0.062±0.00 0.071±0.00 0.218±0.00 2.125±1.42 0.109±0.00 N/A N/A N/A 0.738±0.00 N/A
ENSG00000244139 ENST00000487309 N/A 0.121±0.00 N/A 0.066±0.00 0.127±0.00 0.114±0.00 0.110±0.00 0.188±0.00 0.218±0.00 N/A N/A N/A N/A 0.157±0.10
ENSG00000244308 ENST00000469864 N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A 0.532±0.23 N/A 0.054±0.00

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