C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000321_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030598-ENSDARG00000077356 CGP 7955 4:3229254-3269256
GeneTranscriptPositionBiotype
ENSDARG00000030598 (nampta)
nicotinamide phosphoribosyltransferase a 		ENSDART00000075320 (nampta-001) 3229254-3256323 protein_coding
ENSDARG00000097907 (sypl1)
synaptophysin-like 1 		ENSDART00000156847 (sypl1-001) 3267193-3275921 antisense
CIL_000321_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020572-ENSMUSG00000020570 CGP 10090 12:32820335-32979050
GeneTranscriptPositionBiotype
ENSMUSG00000020570 (Sypl)
synaptophysin-like protein 		ENSMUST00000020885 (Sypl-002) 32954184-32976904 protein_coding
ENSMUST00000076698 (Sypl-001) 32953891-32979050 protein_coding
ENSMUST00000122861 (Sypl-005) 32954247-32974152 nonsense_mediated_decay
ENSMUST00000129592 (Sypl-004) 32954559-32967679 processed_transcript
ENSMUST00000131562 (Sypl-003) 32965326-32970342 retained_intron
ENSMUST00000139339 (Sypl-006) 32965406-32969446 processed_transcript
ENSMUSG00000020572 (Nampt)
nicotinamide phosphoribosyltransferase 		ENSMUST00000020886 (Nampt-201) 32820335-32853369 protein_coding
ENSMUSG00000096954 (Gdap10)
ganglioside-induced differentiation-associated-protein 10 		ENSMUST00000180613 (Gdap10-201) 32821872-32826904 lincRNA
ENSMUSG00000097494 (4933406C10Rik)
RIKEN cDNA 4933406C10 gene 		ENSMUST00000180391 (4933406C10Rik-201) 32924957-32953783 lincRNA
ENSMUST00000181670 (4933406C10Rik-202) 32919384-32953789 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000321_0001ENSDARG00000030598ENSDART00000075320ENSDARG00000097907ENSDART00000156847CIL_000321_0002ENSMUSG00000020570ENSMUST00000020885ENSMUST00000076698ENSMUST00000122861ENSMUST00000129592ENSMUST00000131562ENSMUST00000139339ENSMUSG00000020572ENSMUST00000020886ENSMUSG00000096954ENSMUST00000180613ENSMUSG00000097494ENSMUST00000180391ENSMUST00000181670
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000321_0001ENSDARG00000030598ENSDART00000075320ENSDARG00000097907ENSDART00000156847CIL_000321_0002ENSMUSG00000020570ENSMUST00000020885ENSMUST00000076698ENSMUST00000122861ENSMUST00000139339ENSMUSG00000020572ENSMUST00000020886ENSMUSG00000096954ENSMUST00000180613ENSMUSG00000097494ENSMUST00000180391ENSMUST00000181670
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030598 ENSDART00000075320 N/A N/A N/A 6.933±1.11 N/A N/A 12.546±7.19 3.528±0.00 1.383±0.00 N/A 5.479±0.00 N/A N/A N/A
ENSDARG00000097907 ENSDART00000156847 N/A N/A N/A 4.325±1.23 N/A N/A 2.979±1.54 1.245±0.00 0.240±0.00 N/A 2.277±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020570 ENSMUST00000020885 37.193±2.02 24.677±3.58 63.095±6.10 6.307±3.00 29.085±2.12 47.501±11.11 25.152±1.36 48.728±4.66 14.338±4.00 57.168±2.56 54.445±3.24 24.368±7.55 24.040±17.37 24.946±16.23
ENSMUST00000076698 5.489±1.30 5.385±0.57 11.941±0.11 2.829±0.69 5.967±1.30 8.779±3.07 4.070±0.00 9.039±0.92 3.165±0.35 10.893±1.15 8.693±0.54 5.604±2.48 3.749±2.64 7.252±5.08
ENSMUST00000122861 N/A 21.875±4.34 N/A N/A N/A 41.200±0.00 N/A N/A 13.073±0.00 N/A N/A N/A N/A N/A
ENSMUST00000129592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139339 25.085±3.29 N/A N/A N/A 39.857±24.18 31.818±0.00 N/A 22.287±1.44 9.647±0.26 N/A N/A 12.461±0.00 N/A N/A
ENSMUSG00000020572 ENSMUST00000020886 16.196±0.83 39.622±10.41 17.562±0.02 7.589±2.18 21.266±3.85 11.590±2.08 23.894±5.11 25.064±3.76 9.309±3.11 18.492±5.15 22.491±3.07 12.063±4.08 9.050±3.58 3.289±1.24
ENSMUSG00000096954 ENSMUST00000180613 1.021±0.05 1.202±0.40 0.655±0.08 0.525±0.26 1.583±0.38 0.430±0.12 0.755±0.11 0.734±0.11 0.409±0.16 1.230±0.08 0.547±0.14 0.834±0.35 0.353±0.17 0.320±0.13
ENSMUSG00000097494 ENSMUST00000180391 0.154±0.09 0.245±0.09 1.868±0.55 0.314±0.29 0.248±0.17 0.140±0.04 0.089±0.03 0.169±0.05 0.091±0.04 0.345±0.09 0.253±0.07 0.389±0.19 0.168±0.10 15.604±5.51
ENSMUST00000181670 0.187±0.05 0.226±0.16 1.277±0.32 0.229±0.03 0.210±0.14 0.250±0.17 0.125±0.04 0.152±0.04 0.087±0.04 0.304±0.10 0.149±0.06 0.260±0.20 0.158±0.07 3.578±0.00

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