C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000336_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125817-ENSG00000101224 CGP 9606 20:3783851-3806121
GeneTranscriptPositionBiotype
ENSG00000101224 (CDC25B)
cell division cycle 25B
ENST00000245960 (CDC25B-005) 3795835-3806118 protein_coding
ENST00000340833 (CDC25B-004) 3796431-3805218 protein_coding
ENST00000344256 (CDC25B-201) 3786772-3806121 protein_coding
ENST00000379598 (CDC25B-202) 3786772-3806121 protein_coding
ENST00000439880 (CDC25B-003) 3796291-3806115 protein_coding
ENST00000467519 (CDC25B-002) 3795739-3805237 processed_transcript
ENST00000468979 (CDC25B-008) 3801652-3803175 processed_transcript
ENST00000480816 (CDC25B-007) 3801071-3803457 processed_transcript
ENST00000495915 (CDC25B-006) 3802769-3803433 processed_transcript
ENSG00000125817 (CENPB)
centromere protein B, 80kDa
ENST00000379751 (CENPB-001) 3783851-3786690 protein_coding
CIL_000336_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068267-ENSMUSG00000027330 CGP 10090 2:131175182-131198497
GeneTranscriptPositionBiotype
ENSMUSG00000027329 (Spef1)
sperm flagellar 1
ENSMUST00000028801 (Spef1-001) 131170261-131187282 protein_coding
ENSMUST00000110218 (Spef1-002) 131170316-131175201 protein_coding
ENSMUST00000127987 (Spef1-003) 131171611-131174653 protein_coding
ENSMUSG00000027330 (Cdc25b)
cell division cycle 25B
ENSMUST00000028804 (Cdc25b-001) 131186949-131198495 protein_coding
ENSMUST00000079857 (Cdc25b-002) 131186958-131198497 protein_coding
ENSMUST00000125423 (Cdc25b-003) 131188158-131191918 retained_intron
ENSMUST00000132727 (Cdc25b-007) 131191350-131192102 retained_intron
ENSMUST00000138669 (Cdc25b-006) 131191813-131193279 retained_intron
ENSMUST00000141732 (Cdc25b-004) 131191743-131193392 retained_intron
ENSMUST00000145556 (Cdc25b-005) 131192874-131194406 retained_intron
ENSMUSG00000068267 (Cenpb)
centromere protein B
ENSMUST00000089510 (Cenpb-001) 131175182-131180067 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000336_0001ENSG00000101224ENST00000245960ENST00000340833ENST00000344256ENST00000379598ENST00000439880ENST00000467519ENST00000468979ENST00000480816ENST00000495915ENSG00000125817ENST00000379751CIL_000336_0002ENSMUSG00000027329ENSMUST00000028801ENSMUST00000110218ENSMUST00000127987ENSMUSG00000027330ENSMUST00000028804ENSMUST00000079857ENSMUST00000125423ENSMUST00000132727ENSMUST00000138669ENSMUST00000141732ENSMUST00000145556ENSMUSG00000068267ENSMUST00000089510
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000336_0001ENSG00000101224ENST00000245960ENST00000340833ENST00000379598ENST00000439880ENST00000467519ENST00000468979ENST00000495915ENSG00000125817ENST00000379751CIL_000336_0002ENSMUSG00000027329ENSMUST00000028801ENSMUST00000110218ENSMUSG00000027330ENSMUST00000028804ENSMUST00000079857ENSMUSG00000068267ENSMUST00000089510
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101224 ENST00000245960 2.517±0.00 4.063±0.00 N/A 1.406±0.00 1.553±0.00 1.116±0.00 0.949±0.00 1.664±0.00 1.363±0.00 N/A N/A 8.597±3.70 6.603±0.07 2.463±0.00
ENST00000340833 N/A N/A N/A 0.726±0.00 N/A N/A 0.147±0.00 N/A N/A 2.715±0.00 0.631±0.00 5.059±0.00 N/A N/A
ENST00000344256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379598 N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439880 4.373±0.00 15.544±0.00 0.278±0.00 3.708±2.94 4.585±2.54 4.448±0.60 0.586±0.46 3.990±1.54 0.680±0.00 22.336±17.22 0.668±0.00 39.599±40.67 7.739±2.32 4.266±0.00
ENST00000467519 N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A
ENST00000480816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495915 N/A N/A 4.271±0.00 N/A N/A N/A 3.508±0.00 N/A N/A N/A N/A 368.671±0.00 116.477±0.00 36.738±0.00
ENSG00000125817 ENST00000379751 63.308±0.00 61.165±0.00 1.929±0.00 24.607±20.89 33.745±29.42 28.267±24.95 14.403±11.63 22.896±18.82 13.126±7.09 18.187±15.45 42.306±32.71 48.228±41.43 34.259±4.35 22.811±16.97
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027329 ENSMUST00000028801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.942±0.11
ENSMUST00000110218 N/A N/A N/A 15.370±0.00 N/A N/A N/A N/A N/A N/A N/A 7.806±0.25 N/A 13.538±1.21
ENSMUST00000127987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027330 ENSMUST00000028804 N/A N/A N/A N/A N/A N/A N/A N/A 51.485±19.51 N/A N/A N/A 3.820±0.15 N/A
ENSMUST00000079857 22.777±0.49 N/A 13.614±0.00 11.640±3.25 15.522±3.70 19.018±0.00 N/A N/A 63.027±23.37 20.135±1.76 N/A 17.230±6.73 4.913±0.70 N/A
ENSMUST00000125423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000068267 ENSMUST00000089510 59.458±2.08 66.033±9.53 44.217±8.89 29.078±2.61 48.438±19.76 82.560±3.33 28.527±4.87 58.164±6.20 17.969±4.55 81.803±11.70 28.721±1.43 62.317±24.00 9.612±2.09 4.865±0.60

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