C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089510 Cenpb-001 ENSMUSG00000068267 10090 - 2:131175182-131180067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089510
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089510 59.458±2.08 66.033±9.53 44.217±8.89 29.078±2.61 48.438±19.76 82.560±3.33 28.527±4.87 58.164±6.20 17.969±4.55 81.803±11.70 28.721±1.43 62.317±24.00 9.612±2.09 4.865±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0002 CGP 2:131146324-131187282
CIL_00033B CIL_00033B_0002 CGP 2:131170261-131187282
CIL_000336 CIL_000336_0002 CGP 2:131175182-131198497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 ISO chromosome, centromeric region
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005694 IEA chromosome
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379751 CENPB-001 protein_coding Homo_sapiens 0 2904

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