C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000365_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188162-ENSG00000129152 CGP 9606 11:17547373-17722131
GeneTranscriptPositionBiotype
ENSG00000129152 (MYOD1)
myogenic differentiation 1
ENST00000250003 (MYOD1-001) 17719568-17722131 protein_coding
ENSG00000188162 (OTOG)
otogelin
ENST00000342528 (OTOG-001) 17578264-17638934 protein_coding
ENST00000399391 (OTOG-201) 17547373-17645944 protein_coding
ENST00000399397 (OTOG-002) 17547828-17647150 protein_coding
ENST00000428619 (OTOG-004) 17548177-17553444 protein_coding
ENST00000485669 (OTOG-005) 17555700-17558602 retained_intron
ENST00000498332 (OTOG-003) 17547927-17570604 retained_intron
ENSG00000255335 (RP11-358H18.2)
ENST00000529781 (RP11-358H18.2-001) 17695267-17696940 antisense
CIL_000365_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009487-ENSMUSG00000009471 CGP 10090 7:46240987-46379092
GeneTranscriptPositionBiotype
ENSMUSG00000009471 (Myod1)
myogenic differentiation 1
ENSMUST00000072514 (Myod1-201) 46376474-46379092 protein_coding
ENSMUSG00000009487 (Otog)
otogelin
ENSMUST00000164538 (Otog-201) 46240987-46311434 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000365_0001ENSG00000129152ENST00000250003ENSG00000188162ENST00000342528ENST00000399391ENST00000399397ENST00000428619ENST00000485669ENST00000498332ENSG00000255335ENST00000529781CIL_000365_0002ENSMUSG00000009471ENSMUST00000072514ENSMUSG00000009487ENSMUST00000164538
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000365_0001ENSG00000129152ENST00000250003ENSG00000188162ENST00000342528ENST00000399391ENST00000399397ENST00000428619ENST00000485669ENST00000498332ENSG00000255335ENST00000529781CIL_000365_0002ENSMUSG00000009471ENSMUST00000072514ENSMUSG00000009487ENSMUST00000164538
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129152 ENST00000250003 N/A N/A N/A 0.112±0.00 0.304±0.02 N/A 0.112±0.00 N/A N/A N/A 4.661±0.63 N/A 0.423±0.29 0.552±0.20
ENSG00000188162 ENST00000342528 0.037±0.00 0.035±0.00 N/A 0.013±0.00 0.011±0.00 0.084±0.00 N/A N/A N/A 0.010±0.00 0.021±0.00 0.032±0.00 N/A 0.147±0.11
ENST00000399391 N/A 0.003±0.00 N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A 0.230±0.14
ENST00000399397 N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A 0.269±0.00
ENST00000428619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A
ENST00000485669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.01 N/A N/A
ENST00000498332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.01 N/A N/A
ENSG00000255335 ENST00000529781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.995±0.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009471 ENSMUST00000072514 0.021±0.00 N/A 0.196±0.05 0.404±0.18 2.566±1.17 0.046±0.02 0.036±0.00 0.076±0.03 0.178±0.35 0.419±0.02 10.295±4.47 N/A 0.056±0.04 0.039±0.03
ENSMUSG00000009487 ENSMUST00000164538 N/A 0.012±0.00 0.001±0.00 0.030±0.01 0.004±0.00 0.016±0.01 0.005±0.00 0.010±0.00 0.004±0.00 N/A 0.157±0.10 0.005±0.00 0.007±0.00 0.088±0.05

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