C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: otogelin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164538 Otog-201 ENSMUSG00000009487 10090 + 7:46240987-46311434 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000164538
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000164538 0.012±0.00 0.001±0.00 0.030±0.01 0.004±0.00 0.016±0.01 0.005±0.00 0.010±0.00 0.004±0.00 0.157±0.10 0.005±0.00 0.007±0.00 0.088±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZY CIL_0003ZY_0002 CGP 7:46195350-46311434
CIL_000365 CIL_000365_0002 CGP 7:46240987-46379092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IMP structural molecule activity
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007596 IEA blood coagulation
GO:0007605 IMP sensory perception of sound
GO:0008344 IMP adult locomotory behavior
GO:0046373 IEA L-arabinose metabolic process
GO:0046556 IEA alpha-L-arabinofuranosidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342528 OTOG-001 protein_coding Homo_sapiens 0 3092
ENST00000399391 OTOG-201 protein_coding Homo_sapiens 0 7963
ENST00000399397 OTOG-002 protein_coding Homo_sapiens 0 7980
ENST00000485669 OTOG-005 retained_intron Homo_sapiens 0 303
ENST00000498332 OTOG-003 retained_intron Homo_sapiens 0 1836

Loading