C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00036U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035954-ENSDARG00000061728 CGP 7955 19:32814390-32824781
GeneTranscriptPositionBiotype
ENSDARG00000035954 (tdp2b)
tyrosyl-DNA phosphodiesterase 2b
ENSDART00000103612 (tdp2b-001) 32814390-32821719 protein_coding
ENSDARG00000061728 (acot13)
acyl-CoA thioesterase 13
ENSDART00000088401 (acot13-201) 32822331-32824711 protein_coding
ENSDART00000134107 (acot13-001) 32822247-32824781 protein_coding
CIL_00036U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111802-ENSG00000112304 CGP 9606 6:24649977-24705065
GeneTranscriptPositionBiotype
ENSG00000111802 (TDP2)
tyrosyl-DNA phosphodiesterase 2
ENST00000341060 (TDP2-002) 24649979-24666591 protein_coding
ENST00000378198 (TDP2-001) 24649977-24667033 protein_coding
ENST00000478285 (TDP2-004) 24654378-24659172 processed_transcript
ENST00000478507 (TDP2-005) 24650987-24666930 processed_transcript
ENST00000480495 (TDP2-003) 24665987-24666786 processed_transcript
ENSG00000112304 (ACOT13)
acyl-CoA thioesterase 13
ENST00000230048 (ACOT13-001) 24667071-24705046 protein_coding
ENST00000476436 (ACOT13-002) 24687402-24701714 processed_transcript
ENST00000537591 (ACOT13-201) 24667035-24705065 protein_coding
ENSG00000272345 (RP1-30M3.5)
ENST00000607014 (RP1-30M3.5-001) 24700907-24701793 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036U_0001ENSDARG00000035954ENSDART00000103612ENSDARG00000061728ENSDART00000088401ENSDART00000134107CIL_00036U_0002ENSG00000111802ENST00000341060ENST00000378198ENST00000478285ENST00000478507ENST00000480495ENSG00000112304ENST00000230048ENST00000476436ENST00000537591ENSG00000272345ENST00000607014
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036U_0001ENSDARG00000035954ENSDART00000103612ENSDARG00000061728ENSDART00000088401ENSDART00000134107CIL_00036U_0002ENSG00000111802ENST00000341060ENST00000378198ENST00000478285ENST00000478507ENSG00000112304ENST00000230048ENST00000476436ENSG00000272345ENST00000607014
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035954 ENSDART00000103612 N/A N/A N/A 1.467±0.41 N/A N/A 1.376±0.64 6.621±2.98 0.387±0.00 N/A 0.936±0.00 N/A N/A N/A
ENSDARG00000061728 ENSDART00000088401 N/A N/A N/A N/A N/A N/A 2.878±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134107 N/A N/A N/A 5.227±3.49 N/A N/A 13.958±4.35 6.873±0.00 0.218±0.00 N/A 10.460±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111802 ENST00000341060 N/A N/A 1.434±0.00 N/A 1.357±0.00 N/A N/A N/A N/A 1.322±0.00 N/A 2.005±0.00 N/A N/A
ENST00000378198 10.199±0.00 8.110±0.00 2.974±0.00 9.699±2.50 10.047±3.03 24.318±2.05 5.239±3.33 13.516±10.82 8.021±1.59 6.732±2.11 2.282±1.62 10.317±1.08 6.628±0.78 14.229±8.93
ENST00000478285 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.773±0.00 0.318±0.00 N/A N/A N/A
ENST00000478507 10.607±0.00 N/A N/A 14.969±0.00 N/A N/A N/A N/A N/A N/A N/A 11.547±0.00 10.309±0.00 8.552±0.00
ENST00000480495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000112304 ENST00000230048 N/A N/A 3.138±0.00 3.518±0.00 2.192±0.00 2.622±0.47 2.451±0.49 8.183±0.00 2.732±1.27 1.717±0.00 2.141±0.26 3.512±0.79 2.046±0.16 N/A
ENST00000476436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.151±0.00
ENST00000537591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272345 ENST00000607014 N/A N/A N/A N/A N/A N/A 8.461±0.00 32.240±0.00 13.907±0.00 N/A N/A 75.132±0.00 63.966±0.00 130.551±0.00

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