C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00036Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182993-ENSG00000182993 CGP 9606 12:14803572-14906586
GeneTranscriptPositionBiotype
ENSG00000111339 (ART4)
ADP-ribosyltransferase 4 (Dombrock blood group) 		ENST00000228936 (ART4-001) 14825569-14843495 protein_coding
ENST00000420600 (ART4-002) 14840360-14843062 protein_coding
ENST00000430129 (ART4-003) 14829354-14843062 protein_coding
ENST00000544616 (ART4-004) 14829354-14843062 protein_coding
ENSG00000111341 (MGP)
matrix Gla protein 		ENST00000228938 (MGP-004) 14881898-14885857 protein_coding
ENST00000507170 (MGP-002) 14883054-14885854 retained_intron
ENST00000539261 (MGP-001) 14881181-14885926 protein_coding
ENST00000545199 (MGP-003) 14881891-14884245 protein_coding
ENSG00000179256 (SMCO3)
single-pass membrane protein with coiled-coil domains 3 		ENST00000316048 (SMCO3-001) 14804650-14814182 protein_coding
ENSG00000182993 (C12orf60)
chromosome 12 open reading frame 60 		ENST00000330828 (C12orf60-001) 14803572-14824415 protein_coding
ENST00000527783 (C12orf60-002) 14803677-14906586 processed_transcript
ENST00000533472 (C12orf60-003) 14803666-14904610 processed_transcript
ENST00000543822 (C12orf60-004) 14885716-14904661 processed_transcript
ENSG00000256339 (RP11-233G1.4)
 ENST00000444324 (RP11-233G1.4-001) 14841092-14844708 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00036Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047515-ENSMUSG00000047515 CGP 10090 6:136828843-136840536
GeneTranscriptPositionBiotype
ENSMUSG00000043298 (Smco3)
single-pass membrane protein with coiled-coil domains 3 		ENSMUST00000068293 (Smco3-001) 136829927-136835450 protein_coding
ENSMUST00000111894 (Smco3-002) 136830421-136835452 protein_coding
ENSMUSG00000047515 (BC049715)
cDNA sequence BC049715 		ENSMUST00000052702 (BC049715-001) 136828843-136840536 protein_coding
ENSMUST00000163640 (BC049715-201) 136839764-136840507 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036Y_0001ENSG00000111339ENST00000228936ENST00000420600ENST00000430129ENST00000544616ENSG00000111341ENST00000228938ENST00000507170ENST00000539261ENST00000545199ENSG00000179256ENST00000316048ENSG00000182993ENST00000330828ENST00000527783ENST00000533472ENST00000543822ENSG00000256339ENST00000444324CIL_00036Y_0002ENSMUSG00000043298ENSMUST00000068293ENSMUST00000111894ENSMUSG00000047515ENSMUST00000052702ENSMUST00000163640
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036Y_0001ENSG00000111339ENST00000228936ENST00000420600ENSG00000111341ENST00000228938ENST00000539261ENST00000545199ENSG00000179256ENST00000316048ENSG00000182993ENST00000330828ENSG00000256339ENST00000444324CIL_00036Y_0002ENSMUSG00000043298ENSMUST00000068293ENSMUST00000111894ENSMUSG00000047515ENSMUST00000052702ENSMUST00000163640
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111339 ENST00000228936 0.163±0.00 3.793±0.00 0.725±0.00 0.081±0.01 0.153±0.04 0.126±0.01 0.565±0.22 2.788±2.23 1.152±0.84 0.329±0.07 0.081±0.00 0.052±0.04 0.982±0.38 0.323±0.28
ENST00000420600 N/A N/A N/A 0.126±0.00 0.732±0.00 0.130±0.00 1.045±0.00 3.812±3.06 N/A 0.379±0.00 N/A 0.220±0.09 2.527±1.15 0.936±0.00
ENST00000430129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000111341 ENST00000228938 201.441±0.00 241.948±0.00 N/A 35.494±0.00 466.851±0.00 857.565±0.00 N/A 160.556±0.00 7.308±0.00 752.391±0.00 56.952±0.00 128.125±0.00 30.107±15.85 19.765±0.00
ENST00000507170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539261 N/A N/A 29.453±0.00 4.474±0.00 164.634±0.00 33.322±0.00 28.339±0.00 4.097±0.00 115.579±0.00 95.772±0.00 9.393±0.00 21.422±14.95 13.453±9.51 5.290±0.00
ENST00000545199 94.894±0.00 151.391±0.00 27.303±0.00 8.281±0.00 231.426±106.58 49.380±0.00 108.642±82.45 263.846±0.00 65.006±59.55 682.833±0.00 26.592±0.99 149.821±135.21 163.650±26.14 348.109±334.94
ENSG00000179256 ENST00000316048 0.184±0.00 0.613±0.00 N/A 0.027±0.00 0.128±0.00 0.248±0.04 0.084±0.00 1.196±0.00 0.199±0.05 0.251±0.22 N/A 0.106±0.04 0.302±0.01 0.120±0.06
ENSG00000182993 ENST00000330828 N/A N/A N/A N/A N/A N/A N/A 0.738±0.00 0.563±0.00 N/A N/A N/A N/A 2.937±0.00
ENST00000527783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256339 ENST00000444324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.367±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043298 ENSMUST00000068293 0.250±0.14 N/A 0.104±0.00 0.182±0.04 0.401±0.10 0.161±0.00 0.068±0.02 0.402±0.06 0.176±0.08 0.129±0.02 0.146±0.09 0.218±0.11 0.323±0.30 N/A
ENSMUST00000111894 0.229±0.14 0.364±0.10 N/A 1.273±0.00 0.235±0.02 0.167±0.07 0.123±0.03 0.374±0.15 0.067±0.02 0.126±0.00 0.103±0.04 0.203±0.06 0.213±0.12 N/A
ENSMUSG00000047515 ENSMUST00000052702 0.096±0.01 0.135±0.05 0.035±0.00 N/A N/A N/A 0.100±0.05 0.303±0.02 0.211±0.06 N/A N/A 0.197±0.00 N/A 15.271±4.29
ENSMUST00000163640 0.048±0.00 N/A 0.101±0.00 N/A 0.481±0.29 0.278±0.11 0.139±0.01 0.293±0.11 0.361±0.21 0.246±0.14 0.074±0.00 0.433±0.17 0.155±0.01 31.134±3.47

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