C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00038P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109790-ENSG00000157796 CGP 9606 4:39045039-39285810
GeneTranscriptPositionBiotype
ENSG00000109790 (KLHL5)
kelch-like family member 5 		ENST00000261425 (KLHL5-003) 39045039-39122209 protein_coding
ENST00000261426 (KLHL5-002) 39062440-39122206 protein_coding
ENST00000381930 (KLHL5-001) 39062440-39116332 protein_coding
ENST00000504108 (KLHL5-006) 39062232-39121205 protein_coding
ENST00000508137 (KLHL5-005) 39045060-39122208 protein_coding
ENST00000514399 (KLHL5-004) 39062940-39081182 nonsense_mediated_decay
ENST00000515612 (KLHL5-007) 39103315-39126857 protein_coding
ENSG00000157796 (WDR19)
WD repeat domain 19 		ENST00000399820 (WDR19-001) 39182404-39285810 protein_coding
ENST00000502389 (WDR19-013) 39182531-39194781 retained_intron
ENST00000502718 (WDR19-020) 39234767-39237994 processed_transcript
ENST00000503697 (WDR19-002) 39182504-39215919 nonsense_mediated_decay
ENST00000503733 (WDR19-018) 39276964-39285808 retained_intron
ENST00000505055 (WDR19-012) 39182529-39205572 nonsense_mediated_decay
ENST00000506503 (WDR19-006) 39182548-39219133 protein_coding
ENST00000506869 (WDR19-003) 39182529-39285780 nonsense_mediated_decay
ENST00000507228 (WDR19-015) 39228531-39240334 nonsense_mediated_decay
ENST00000509560 (WDR19-010) 39182529-39203722 protein_coding
ENST00000510315 (WDR19-017) 39278271-39285636 retained_intron
ENST00000511729 (WDR19-009) 39182524-39234831 processed_transcript
ENST00000512095 (WDR19-007) 39215882-39275339 retained_intron
ENST00000512112 (WDR19-011) 39182529-39203727 protein_coding
ENST00000512448 (WDR19-014) 39199478-39206115 retained_intron
ENST00000512534 (WDR19-008) 39270053-39285809 retained_intron
ENST00000512588 (WDR19-019) 39276962-39285810 retained_intron
ENST00000515631 (WDR19-016) 39228555-39234875 processed_transcript
ENSG00000249207 (RP11-360F5.1)
 ENST00000509449 (RP11-360F5.1-001) 39112677-39126818 antisense
ENSG00000249685 (RP11-360F5.3)
 ENST00000507579 (RP11-360F5.3-001) 39133913-39135608 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_00038P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054920-ENSMUSG00000037890 CGP 10090 5:65107568-65260415
GeneTranscriptPositionBiotype
ENSMUSG00000037890 (Wdr19)
WD repeat domain 19 		ENSMUST00000041892 (Wdr19-201) 65199696-65260415 protein_coding
ENSMUSG00000054920 (Klhl5)
kelch-like 5 		ENSMUST00000031089 (Klhl5-003) 65131189-65168045 protein_coding
ENSMUST00000101191 (Klhl5-002) 65131231-65167978 protein_coding
ENSMUST00000101192 (Klhl5-001) 65107568-65168188 protein_coding
ENSMUST00000125950 (Klhl5-004) 65131673-65153632 protein_coding
ENSMUST00000126692 (Klhl5-005) 65156070-65168142 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038P_0001ENSG00000109790ENST00000261425ENST00000261426ENST00000381930ENST00000504108ENST00000508137ENST00000514399ENST00000515612ENSG00000157796ENST00000399820ENST00000502389ENST00000502718ENST00000503697ENST00000503733ENST00000505055ENST00000506503ENST00000506869ENST00000507228ENST00000509560ENST00000510315ENST00000511729ENST00000512095ENST00000512112ENST00000512448ENST00000512534ENST00000512588ENST00000515631ENSG00000249207ENST00000509449ENSG00000249685ENST00000507579CIL_00038P_0002ENSMUSG00000037890ENSMUST00000041892ENSMUSG00000054920ENSMUST00000031089ENSMUST00000101191ENSMUST00000101192ENSMUST00000125950ENSMUST00000126692
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038P_0001ENSG00000109790ENST00000261425ENST00000381930ENST00000504108ENST00000508137ENST00000515612ENSG00000157796ENST00000399820ENST00000506503ENST00000506869ENST00000507228ENST00000509560ENST00000512095ENST00000512112ENST00000512534ENST00000512588ENSG00000249207ENST00000509449ENSG00000249685ENST00000507579CIL_00038P_0002ENSMUSG00000037890ENSMUST00000041892ENSMUSG00000054920ENSMUST00000031089ENSMUST00000101191ENSMUST00000101192ENSMUST00000126692
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109790 ENST00000261425 3.974±0.00 N/A N/A 1.577±0.00 5.270±0.00 N/A 0.676±0.00 1.664±0.45 N/A 3.443±0.00 0.537±0.00 1.252±0.00 N/A N/A
ENST00000261426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381930 N/A 3.064±0.00 N/A N/A 1.021±0.00 N/A N/A N/A N/A 1.094±0.00 N/A N/A N/A N/A
ENST00000504108 N/A N/A N/A N/A 1.990±0.00 1.274±0.00 N/A N/A N/A 1.968±0.00 N/A N/A N/A N/A
ENST00000508137 12.361±0.00 9.383±0.00 1.795±0.00 5.801±1.73 10.808±6.21 9.384±7.16 1.254±0.92 5.266±0.19 8.940±0.30 6.977±2.06 1.363±0.00 4.437±1.49 7.537±1.41 3.912±1.82
ENST00000514399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.742±0.00 14.935±0.00 4.790±0.00
ENSG00000157796 ENST00000399820 0.781±0.00 0.313±0.00 1.465±0.00 1.198±0.00 0.676±0.00 2.204±0.00 N/A 1.658±0.36 1.768±0.00 0.440±0.00 N/A 1.918±1.47 0.756±0.03 4.969±2.15
ENST00000502389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506503 N/A N/A 0.964±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506869 N/A 0.930±0.00 N/A 1.596±0.00 0.901±0.00 1.529±0.00 0.286±0.06 0.693±0.00 0.690±0.00 0.908±0.41 N/A 1.364±0.29 0.196±0.00 2.333±0.00
ENST00000507228 N/A N/A N/A N/A N/A N/A 3.043±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000509560 N/A N/A N/A N/A N/A N/A 2.081±0.00 N/A 6.990±0.00 N/A N/A 10.055±0.00 N/A N/A
ENST00000510315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512095 1.296±0.00 0.809±0.00 N/A 1.599±0.00 1.137±0.00 1.325±0.00 0.631±0.00 1.219±0.00 1.242±0.00 1.298±0.16 0.476±0.00 1.414±0.55 0.603±0.00 2.855±0.80
ENST00000512112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.861±0.00 N/A N/A N/A
ENST00000512448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512534 0.720±0.00 1.215±0.00 N/A 1.582±0.00 1.216±0.00 N/A 0.280±0.03 1.406±0.00 1.132±0.00 1.707±0.00 N/A 2.239±1.02 0.264±0.00 6.283±0.00
ENST00000512588 2.404±0.00 N/A N/A N/A N/A N/A 1.010±0.00 3.330±0.00 1.874±0.00 3.790±0.00 0.731±0.00 5.133±3.12 N/A N/A
ENST00000515631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249207 ENST00000509449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.151±0.00 N/A 4.804±0.00
ENSG00000249685 ENST00000507579 0.974±0.00 2.214±0.00 N/A 0.725±0.22 0.981±0.86 0.435±0.00 0.287±0.00 0.663±0.00 0.138±0.00 1.024±0.00 0.203±0.00 0.331±0.27 0.603±0.28 0.298±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037890 ENSMUST00000041892 0.384±0.10 0.619±0.41 0.921±0.00 2.238±1.14 0.632±0.38 0.752±0.42 0.272±0.17 0.668±0.11 0.315±0.11 2.668±0.00 0.194±0.10 2.854±1.91 0.962±0.38 6.964±1.23
ENSMUSG00000054920 ENSMUST00000031089 N/A 6.327±0.00 N/A 2.463±0.00 N/A N/A N/A N/A N/A N/A N/A 5.862±1.77 N/A N/A
ENSMUST00000101191 N/A N/A N/A 8.431±4.28 2.643±0.50 N/A 2.201±0.00 2.326±0.00 3.366±0.77 30.942±8.69 N/A 3.930±0.00 N/A N/A
ENSMUST00000101192 30.254±7.82 19.726±4.88 16.381±0.09 6.706±1.62 11.032±2.07 11.106±2.18 5.296±1.21 13.015±0.57 5.490±1.79 35.199±4.54 1.653±0.35 18.937±2.44 4.148±1.87 5.880±1.75
ENSMUST00000125950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126692 N/A N/A N/A 2.076±0.00 N/A N/A N/A N/A 1.986±0.00 N/A 0.385±0.00 4.704±1.49 1.496±0.72 0.591±0.00

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