C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399820 WDR19-001 ENSG00000157796 9606 + 4:39182404-39285810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000399820
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000399820 0.781±0.00 0.313±0.00 1.465±0.00 1.198±0.00 0.676±0.00 2.204±0.00 1.658±0.36 1.768±0.00 0.440±0.00 1.918±1.47 0.756±0.03 4.969±2.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038P CIL_00038P_0001 CGP 4:39045039-39285810
CIL_00038O CIL_00038O_0001 CGP 4:39182404-39366375

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0001701 IEA in utero embryonic development
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005929 IEA cilium
GO:0007224 IEA smoothened signaling pathway
GO:0030326 IEA embryonic limb morphogenesis
GO:0030991 IDA intraciliary transport particle A
GO:0031076 IEA embryonic camera-type eye development
GO:0031513 ISS nonmotile primary cilium
GO:0031514 ISS motile cilium
GO:0032391 ISS photoreceptor connecting cilium
GO:0035721 IMP intraciliary retrograde transport
GO:0042384 IEA cilium assembly
GO:0042471 IEA ear morphogenesis
GO:0048701 IEA embryonic cranial skeleton morphogenesis
GO:0050877 IEA neurological system process
GO:0055123 IEA digestive system development
GO:0060271 IEA cilium morphogenesis
GO:0060830 IEA ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 IEA smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 IEA myotome development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041892 Wdr19-201 protein_coding Mus_musculus 0 4390

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